Protein Family : RING domain ligase2 124251703

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  46
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46 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29929.t000298 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN R. communis v0.1 3820   29929: 1700910-1704729
29633.t000054 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED R. communis v0.1 3749   29633: 333506-337254
orange1.1g015418m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 5177   scaffold00252: 103591-108767
orange1.1g042752m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 3587   scaffold00003: 1165415-1169001
AT5G14420 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG2 3199   Chr5: 4648111-4651309
AT3G01650 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG1 3258   Chr3: 242011-245268
Thhalv10020651m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3168   scaffold_13: 9326377-9329544
Thhalv10013466m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3217   scaffold_2: 4715506-4718722
Ciclev10015247m.g (1 of 1) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. clementina v1.0 4970   scaffold_2: 10050552-10055521
Ciclev10031509m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. clementina v1.0 4817   scaffold_4: 22007451-22012267
Lus10022294.g (1 of 3) PF07002//PF13920 - Copine (Copine) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) L. usitatissimum v1.0 2259   scaffold225: 584576-586834
Lus10006463.g (1 of 4) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN L. usitatissimum v1.0 2502   scaffold743: 216016-218517
Lus10011405.g (1 of 4) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN L. usitatissimum v1.0 2563   scaffold744: 385626-388188
Gorai.012G065700 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 4026   Chr12: 9290538-9294563
Gorai.009G335200 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 6818   Chr09: 35505410-35512227
Gorai.006G034900 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 3731   Chr06: 9247123-9250853
Thecc1EG010629 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN T. cacao v1.1 5810   scaffold_2: 34555070-34560879
Thecc1EG017007 (1 of 1) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED T. cacao v1.1 5019   scaffold_4: 1343780-1348798
Araha.15162s0006 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. halleri v1.1 3251   Scaffold15162: 22792-26042
Araha.35673s0006 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. halleri v1.1 3263   Scaffold35673: 13648-16910
Cagra.1561s0031 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. grandiflora v1.1 3259   Scaffold1561: 116667-119925
Cagra.3166s0047 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. grandiflora v1.1 3193   Scaffold3166: 153518-156710
Brara.B00551 (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. rapa FPsc v1.3 3295   A02: 2500687-2503981
Brara.C00624 (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. rapa FPsc v1.3 2894   A03: 2861903-2864796
Brara.J02016 (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. rapa FPsc v1.3 2970   A10: 15830174-15833143
Brara.C02935 (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. rapa FPsc v1.3 2863   A03: 15047206-15050068
Brara.E03668 (1 of 1) KOG1327 - Copine B. rapa FPsc v1.3 3295   A05: 28476675-28479969
Bostr.2902s0179 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. stricta v1.2 2759   Scaffold2902: 824832-827590
Bostr.1460s0046 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED B. stricta v1.2 3202   Scaffold1460: 194195-197396
SapurV1A.1481s0050 (1 of 4) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN S. purpurea v1.0 4300   Scaffold1481: 37173-41472

46 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29633.m000935 R. communis v0.1 124251703 RING domain ligase2 2 5268 Malvidae
orange1.1g015418m C. sinensis v1.1 124251703 RING domain ligase2 2 5268 Malvidae
AT3G01650.1 A. thaliana TAIR10 124251703 RING domain ligase2 2 5268 Malvidae
AT5G14420.1 A. thaliana TAIR10 124251703 RING domain ligase2 2 5268 Malvidae
Lus10022294 L. usitatissimum v1.0 124251703 RING domain ligase2 3 5268 Malvidae
Gorai.006G034900.1 G. raimondii v2.1 124251703 RING domain ligase2 3 5268 Malvidae
Thecc1EG017007t3 T. cacao v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Cagra.3166s0047.1.p C. grandiflora v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Brara.C00624.1.p B. rapa FPsc v1.3 124251703 RING domain ligase2 5 5268 Malvidae
SapurV1A.1481s0050.1.p S. purpurea v1.0 124251703 RING domain ligase2 3 5268 Malvidae
Manes.15G152500.1.p M. esculenta v6.1 124251703 RING domain ligase2 4 5268 Malvidae
Potri.008G183600.3.p P. trichocarpa v3.1 124251703 RING domain ligase2 3 5268 Malvidae
Potri.001G342200.3.p P. trichocarpa v3.1 124251703 RING domain ligase2 3 5268 Malvidae
Podel.01G364600.1.p P. deltoides WV94 v2.1 124251703 RING domain ligase2 3 5268 Malvidae
29929.m004795 R. communis v0.1 124251703 RING domain ligase2 2 5268 Malvidae
orange1.1g042752m C. sinensis v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Thhalv10013466m E. salsugineum v1.0 124251703 RING domain ligase2 2 5268 Malvidae
Thhalv10020651m E. salsugineum v1.0 124251703 RING domain ligase2 2 5268 Malvidae
Ciclev10031509m C. clementina v1.0 124251703 RING domain ligase2 2 5268 Malvidae
Ciclev10015247m C. clementina v1.0 124251703 RING domain ligase2 2 5268 Malvidae
Lus10011405 L. usitatissimum v1.0 124251703 RING domain ligase2 3 5268 Malvidae
Lus10006463 L. usitatissimum v1.0 124251703 RING domain ligase2 3 5268 Malvidae
Gorai.009G335200.1 G. raimondii v2.1 124251703 RING domain ligase2 3 5268 Malvidae
Gorai.012G065700.1 G. raimondii v2.1 124251703 RING domain ligase2 3 5268 Malvidae
Thecc1EG010629t2 T. cacao v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Araha.35673s0006.1.p A. halleri v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Araha.15162s0006.1.p A. halleri v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Cagra.1561s0031.1.p C. grandiflora v1.1 124251703 RING domain ligase2 2 5268 Malvidae
Brara.E03668.1.p B. rapa FPsc v1.3 124251703 RING domain ligase2 5 5268 Malvidae
Brara.J02016.1.p B. rapa FPsc v1.3 124251703 RING domain ligase2 5 5268 Malvidae