Gene : Cagra.1561s0031 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Genomic Order:  31
Name:  ? Cagra.1561s0031 Secondary Identifier:  ? PAC:28907412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0031 0.5kb upstream 0.5kb upstream 3759 true Scaffold1561: 116167-119925 Capsella grandiflora
Cagra.1561s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 116167-116666 Capsella grandiflora
Cagra.1561s0031 0.5kb downstream 0.5kb downstream 3759 true Scaffold1561: 116667-120425 Capsella grandiflora
Cagra.1561s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 119926-120425 Capsella grandiflora
Cagra.1561s0031 1.0kb upstream 1.0kb upstream 4259 true Scaffold1561: 115667-119925 Capsella grandiflora
Cagra.1561s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 115667-116666 Capsella grandiflora
Cagra.1561s0031 1.0kb downstream 1.0kb downstream 4259 true Scaffold1561: 116667-120925 Capsella grandiflora
Cagra.1561s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 119926-120925 Capsella grandiflora
Cagra.1561s0031 2.0kb upstream 2.0kb upstream 5259 true Scaffold1561: 114667-119925 Capsella grandiflora
Cagra.1561s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 114667-116666 Capsella grandiflora
Cagra.1561s0031 2.0kb downstream 2.0kb downstream 5259 true Scaffold1561: 116667-121925 Capsella grandiflora
Cagra.1561s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 119926-121925 Capsella grandiflora
Cagra.1561s0031 5.0kb upstream 5.0kb upstream 8259 true Scaffold1561: 111667-119925 Capsella grandiflora
Cagra.1561s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 111667-116666 Capsella grandiflora
Cagra.1561s0031 5.0kb downstream 5.0kb downstream 8259 true Scaffold1561: 116667-124925 Capsella grandiflora
Cagra.1561s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 119926-124925 Capsella grandiflora
Cagra.1561s0031 10.0kb upstream 10.0kb upstream 13259 true Scaffold1561: 106667-119925 Capsella grandiflora
Cagra.1561s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 106667-116666 Capsella grandiflora
Cagra.1561s0031 10.0kb downstream 10.0kb downstream 13259 true Scaffold1561: 116667-129925 Capsella grandiflora
Cagra.1561s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 119926-129925 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372022 5261 Brassicaceae View MSA
123800280 5264 Brassicales-Malvales View MSA
124297713 5266 SBM View MSA
124251703 5268 Malvidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain