Gene : Bostr.1460s0046 B. stricta v1.2
Defline:  (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Genomic Order:  46
Name:  ? Bostr.1460s0046 Secondary Identifier:  ? PAC:30654687
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.1460s0046 0.5kb upstream 0.5kb upstream 3702 true Scaffold1460: 194195-197896 Boechera stricta
Bostr.1460s0046 0.5kb upstream 0.5kb upstream 500 false Scaffold1460: 197397-197896 Boechera stricta
Bostr.1460s0046 0.5kb downstream 0.5kb downstream 3702 true Scaffold1460: 193695-197396 Boechera stricta
Bostr.1460s0046 0.5kb downstream 0.5kb downstream 500 false Scaffold1460: 193695-194194 Boechera stricta
Bostr.1460s0046 1.0kb upstream 1.0kb upstream 4202 true Scaffold1460: 194195-198396 Boechera stricta
Bostr.1460s0046 1.0kb upstream 1.0kb upstream 1000 false Scaffold1460: 197397-198396 Boechera stricta
Bostr.1460s0046 1.0kb downstream 1.0kb downstream 4202 true Scaffold1460: 193195-197396 Boechera stricta
Bostr.1460s0046 1.0kb downstream 1.0kb downstream 1000 false Scaffold1460: 193195-194194 Boechera stricta
Bostr.1460s0046 2.0kb upstream 2.0kb upstream 5202 true Scaffold1460: 194195-199396 Boechera stricta
Bostr.1460s0046 2.0kb upstream 2.0kb upstream 2000 false Scaffold1460: 197397-199396 Boechera stricta
Bostr.1460s0046 2.0kb downstream 2.0kb downstream 5202 true Scaffold1460: 192195-197396 Boechera stricta
Bostr.1460s0046 2.0kb downstream 2.0kb downstream 2000 false Scaffold1460: 192195-194194 Boechera stricta
Bostr.1460s0046 5.0kb upstream 5.0kb upstream 8202 true Scaffold1460: 194195-202396 Boechera stricta
Bostr.1460s0046 5.0kb upstream 5.0kb upstream 5000 false Scaffold1460: 197397-202396 Boechera stricta
Bostr.1460s0046 5.0kb downstream 5.0kb downstream 8202 true Scaffold1460: 189195-197396 Boechera stricta
Bostr.1460s0046 5.0kb downstream 5.0kb downstream 5000 false Scaffold1460: 189195-194194 Boechera stricta
Bostr.1460s0046 10.0kb upstream 10.0kb upstream 13202 true Scaffold1460: 194195-207396 Boechera stricta
Bostr.1460s0046 10.0kb upstream 10.0kb upstream 10000 false Scaffold1460: 197397-207396 Boechera stricta
Bostr.1460s0046 10.0kb downstream 10.0kb downstream 13202 true Scaffold1460: 184195-197396 Boechera stricta
Bostr.1460s0046 10.0kb downstream 10.0kb downstream 10000 false Scaffold1460: 184195-194194 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372022 5261 Brassicaceae View MSA
123800280 5264 Brassicales-Malvales View MSA
124297713 5266 SBM View MSA
124251703 5268 Malvidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain