Gene : Brara.J02016 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Genomic Order:  2016
Name:  ? Brara.J02016 Secondary Identifier:  ? PAC:30613075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02016 0.5kb upstream 0.5kb upstream 3470 true A10: 15829674-15833143 Brassica rapa FPsc
Brara.J02016 0.5kb upstream 0.5kb upstream 500 false A10: 15829674-15830173 Brassica rapa FPsc
Brara.J02016 0.5kb downstream 0.5kb downstream 3470 true A10: 15830174-15833643 Brassica rapa FPsc
Brara.J02016 0.5kb downstream 0.5kb downstream 500 false A10: 15833144-15833643 Brassica rapa FPsc
Brara.J02016 1.0kb upstream 1.0kb upstream 3970 true A10: 15829174-15833143 Brassica rapa FPsc
Brara.J02016 1.0kb upstream 1.0kb upstream 1000 false A10: 15829174-15830173 Brassica rapa FPsc
Brara.J02016 1.0kb downstream 1.0kb downstream 3970 true A10: 15830174-15834143 Brassica rapa FPsc
Brara.J02016 1.0kb downstream 1.0kb downstream 1000 false A10: 15833144-15834143 Brassica rapa FPsc
Brara.J02016 2.0kb upstream 2.0kb upstream 4970 true A10: 15828174-15833143 Brassica rapa FPsc
Brara.J02016 2.0kb upstream 2.0kb upstream 2000 false A10: 15828174-15830173 Brassica rapa FPsc
Brara.J02016 2.0kb downstream 2.0kb downstream 4970 true A10: 15830174-15835143 Brassica rapa FPsc
Brara.J02016 2.0kb downstream 2.0kb downstream 2000 false A10: 15833144-15835143 Brassica rapa FPsc
Brara.J02016 5.0kb upstream 5.0kb upstream 7970 true A10: 15825174-15833143 Brassica rapa FPsc
Brara.J02016 5.0kb upstream 5.0kb upstream 5000 false A10: 15825174-15830173 Brassica rapa FPsc
Brara.J02016 5.0kb downstream 5.0kb downstream 7970 true A10: 15830174-15838143 Brassica rapa FPsc
Brara.J02016 5.0kb downstream 5.0kb downstream 5000 false A10: 15833144-15838143 Brassica rapa FPsc
Brara.J02016 10.0kb upstream 10.0kb upstream 12970 true A10: 15820174-15833143 Brassica rapa FPsc
Brara.J02016 10.0kb upstream 10.0kb upstream 10000 false A10: 15820174-15830173 Brassica rapa FPsc
Brara.J02016 10.0kb downstream 10.0kb downstream 12970 true A10: 15830174-15843143 Brassica rapa FPsc
Brara.J02016 10.0kb downstream 10.0kb downstream 10000 false A10: 15833144-15843143 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346329 5261 Brassicaceae Singleton cluster - no MSA
123842730 5264 Brassicales-Malvales View MSA
124323730 5266 SBM View MSA
124251703 5268 Malvidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier