Gene : Carub.0003s0716 C. rubella v1.1
Defline:  (1 of 2) K11087 - small nuclear ribonucleoprotein D1 (SNRPD1, SMD1) Genomic Order:  716
Name:  ? Carub.0003s0716 Secondary Identifier:  ? PAC:39240806
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s0716 0.5kb upstream 0.5kb upstream 1658 true scaffold_3: 2456300-2457957 Capsella rubella
Carub.0003s0716 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2456300-2456799 Capsella rubella
Carub.0003s0716 0.5kb downstream 0.5kb downstream 1658 true scaffold_3: 2456800-2458457 Capsella rubella
Carub.0003s0716 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2457958-2458457 Capsella rubella
Carub.0003s0716 1.0kb upstream 1.0kb upstream 2158 true scaffold_3: 2455800-2457957 Capsella rubella
Carub.0003s0716 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2455800-2456799 Capsella rubella
Carub.0003s0716 1.0kb downstream 1.0kb downstream 2158 true scaffold_3: 2456800-2458957 Capsella rubella
Carub.0003s0716 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2457958-2458957 Capsella rubella
Carub.0003s0716 2.0kb upstream 2.0kb upstream 3158 true scaffold_3: 2454800-2457957 Capsella rubella
Carub.0003s0716 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2454800-2456799 Capsella rubella
Carub.0003s0716 2.0kb downstream 2.0kb downstream 3158 true scaffold_3: 2456800-2459957 Capsella rubella
Carub.0003s0716 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2457958-2459957 Capsella rubella
Carub.0003s0716 5.0kb upstream 5.0kb upstream 6158 true scaffold_3: 2451800-2457957 Capsella rubella
Carub.0003s0716 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2451800-2456799 Capsella rubella
Carub.0003s0716 5.0kb downstream 5.0kb downstream 6158 true scaffold_3: 2456800-2462957 Capsella rubella
Carub.0003s0716 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2457958-2462957 Capsella rubella
Carub.0003s0716 10.0kb upstream 10.0kb upstream 11158 true scaffold_3: 2446800-2457957 Capsella rubella
Carub.0003s0716 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2446800-2456799 Capsella rubella
Carub.0003s0716 10.0kb downstream 10.0kb downstream 11158 true scaffold_3: 2456800-2467957 Capsella rubella
Carub.0003s0716 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2457958-2467957 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362253 5261 Brassicaceae View MSA
123839137 5264 Brassicales-Malvales View MSA
124351091 5266 SBM View MSA
124247132 5268 Malvidae View MSA
124060560 5270 Rosid View MSA
123750770 5271 Pentapetalae View MSA
122792948 5272 Eudicot View MSA
122045867 5273 Angiosperm View MSA
121351003 5274 Embryophyte View MSA
123426098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain