Gene : Araha.12231s0001 A. halleri v1.1
Defline:  (1 of 8) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  1
Name:  ? Araha.12231s0001 Secondary Identifier:  ? PAC:28863085
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12231s0001 0.5kb upstream 0.5kb upstream 3468 true Scaffold12231: 1-3468 Arabidopsis halleri
Araha.12231s0001 0.5kb upstream 0.5kb upstream 95 false Scaffold12231: 1-95 Arabidopsis halleri
Araha.12231s0001 0.5kb downstream 0.5kb downstream 3873 true Scaffold12231: 96-3968 Arabidopsis halleri
Araha.12231s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12231: 3469-3968 Arabidopsis halleri
Araha.12231s0001 1.0kb upstream 1.0kb upstream 3468 true Scaffold12231: 1-3468 Arabidopsis halleri
Araha.12231s0001 1.0kb upstream 1.0kb upstream 95 false Scaffold12231: 1-95 Arabidopsis halleri
Araha.12231s0001 1.0kb downstream 1.0kb downstream 4373 true Scaffold12231: 96-4468 Arabidopsis halleri
Araha.12231s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12231: 3469-4468 Arabidopsis halleri
Araha.12231s0001 2.0kb upstream 2.0kb upstream 3468 true Scaffold12231: 1-3468 Arabidopsis halleri
Araha.12231s0001 2.0kb upstream 2.0kb upstream 95 false Scaffold12231: 1-95 Arabidopsis halleri
Araha.12231s0001 2.0kb downstream 2.0kb downstream 5373 true Scaffold12231: 96-5468 Arabidopsis halleri
Araha.12231s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12231: 3469-5468 Arabidopsis halleri
Araha.12231s0001 5.0kb upstream 5.0kb upstream 3468 true Scaffold12231: 1-3468 Arabidopsis halleri
Araha.12231s0001 5.0kb upstream 5.0kb upstream 95 false Scaffold12231: 1-95 Arabidopsis halleri
Araha.12231s0001 5.0kb downstream 5.0kb downstream 8373 true Scaffold12231: 96-8468 Arabidopsis halleri
Araha.12231s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12231: 3469-8468 Arabidopsis halleri
Araha.12231s0001 10.0kb upstream 10.0kb upstream 3468 true Scaffold12231: 1-3468 Arabidopsis halleri
Araha.12231s0001 10.0kb upstream 10.0kb upstream 95 false Scaffold12231: 1-95 Arabidopsis halleri
Araha.12231s0001 10.0kb downstream 10.0kb downstream 13373 true Scaffold12231: 96-13468 Arabidopsis halleri
Araha.12231s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12231: 3469-13468 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373414 5261 Brassicaceae View MSA
123827684 5264 Brassicales-Malvales View MSA
124338334 5266 SBM View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain