Protein Family : RNApolymerase sigma subunit 2 124251670

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30148.t000011 (1 of 1) PF00140//PF04539//PF04542//PF04545 - Sigma-70 factor, region 1.2 (Sigma70_r1_2) // Sigma-70 region 3 (Sigma70_r3) // Sigma-70 region 2 (Sigma70_r2) // Sigma-70, region 4 (Sigma70_r4) R. communis v0.1 4863   30148: 70537-75399
orange1.1g007404m.g (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO C. sinensis v1.1 4562   scaffold00238: 98595-103156
AT1G08540 (1 of 6) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO A. thaliana TAIR10 SIG2 3510   Chr1: 2703336-2706845
Thhalv10007187m.g (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO E. salsugineum v1.0 3279   scaffold_5: 12884535-12887813
Ciclev10030998m.g (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO C. clementina v1.0 4569   scaffold_4: 17143350-17147918
Lus10001339.g (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2713   scaffold2292: 76950-79662
Lus10013642.g (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2769   scaffold317: 226456-229224
Lus10020325.g (1 of 10) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2908   scaffold641: 404486-407393
Lus10005668.g (1 of 10) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO L. usitatissimum v1.0 2463   scaffold911: 57435-59897
Gorai.007G347300 (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO G. raimondii v2.1 4086   Chr07: 57758649-57762734
Thecc1EG025741 (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED T. cacao v1.1 4954   scaffold_5: 34392376-34397329
Araha.12231s0001 (1 of 8) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO A. halleri v1.1 3373   Scaffold12231: 96-3468
Cagra.4395s0044 (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO C. grandiflora v1.1 3530   Scaffold4395: 174517-178046
Brara.H02868 (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO B. rapa FPsc v1.3 2725   A08: 22175562-22178286
Brara.F00534 (1 of 11) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO B. rapa FPsc v1.3 4259   A06: 3190057-3194315
Bostr.25219s0090 (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO B. stricta v1.2 3654   Scaffold25219: 436081-439734
SapurV1A.0671s0070 (1 of 1) PF04539//PF04545 - Sigma-70 region 3 (Sigma70_r3) // Sigma-70, region 4 (Sigma70_r4) S. purpurea v1.0 6415   chr13: 9318910-9325324
SapurV1A.1953s0020 (1 of 3) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED S. purpurea v1.0 6034   Scaffold1953: 30925-36958
Manes.08G156300 (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO M. esculenta v6.1 5017   Chromosome08: 31987998-31993014
AL1G18970 (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO A. lyrata v2.1 3229   scaffold_1: 3222836-3226064
Potri.013G070500 (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED P. trichocarpa v3.1 4753   Chr13: 5888857-5893609
Potri.019G044200 (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED P. trichocarpa v3.1 6178   Chr19: 5197252-5203429
Podel.13G075100 (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED P. deltoides WV94 v2.1 4748   Chr13: 6075302-6080049
Podel.19G046600 (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED P. deltoides WV94 v2.1 6106   Chr19: 5462552-5468657
Carub.0001s0790 (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED C. rubella v1.1 3564   scaffold_1: 2784000-2787563

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g007404m C. sinensis v1.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Thhalv10007187m E. salsugineum v1.0 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Lus10020325 L. usitatissimum v1.0 124251670 RNApolymerase sigma subunit 2 4 5268 Malvidae
Lus10013642 L. usitatissimum v1.0 124251670 RNApolymerase sigma subunit 2 4 5268 Malvidae
Cagra.4395s0044.1.p C. grandiflora v1.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Brara.F00534.1.p B. rapa FPsc v1.3 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
SapurV1A.1953s0020.1.p S. purpurea v1.0 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
SapurV1A.0671s0070.1.p S. purpurea v1.0 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
Potri.013G070500.1.p P. trichocarpa v3.1 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
Potri.019G044200.1.p P. trichocarpa v3.1 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
30148.m001412 R. communis v0.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
AT1G08540.1 A. thaliana TAIR10 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Ciclev10030998m C. clementina v1.0 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Lus10001339 L. usitatissimum v1.0 124251670 RNApolymerase sigma subunit 2 4 5268 Malvidae
Lus10005668 L. usitatissimum v1.0 124251670 RNApolymerase sigma subunit 2 4 5268 Malvidae
Gorai.007G347300.1 G. raimondii v2.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Thecc1EG025741t1 T. cacao v1.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Araha.12231s0001.1.p A. halleri v1.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Brara.H02868.1.p B. rapa FPsc v1.3 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
Bostr.25219s0090.1.p B. stricta v1.2 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Manes.08G156300.1.p M. esculenta v6.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
AL1G18970.t1 A. lyrata v2.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae
Podel.13G075100.1.p P. deltoides WV94 v2.1 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
Podel.19G046600.1.p P. deltoides WV94 v2.1 124251670 RNApolymerase sigma subunit 2 2 5268 Malvidae
Carub.0001s0790.1.p C. rubella v1.1 124251670 RNApolymerase sigma subunit 2 1 5268 Malvidae