Gene : Potri.019G044200 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED Genomic Order:  455
Name:  ? Potri.019G044200 Secondary Identifier:  ? PAC:37261097
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.019G044200 0.5kb upstream 0.5kb upstream 6678 true Chr19: 5196752-5203429 Populus trichocarpa
Potri.019G044200 0.5kb upstream 0.5kb upstream 500 false Chr19: 5196752-5197251 Populus trichocarpa
Potri.019G044200 0.5kb downstream 0.5kb downstream 6678 true Chr19: 5197252-5203929 Populus trichocarpa
Potri.019G044200 0.5kb downstream 0.5kb downstream 500 false Chr19: 5203430-5203929 Populus trichocarpa
Potri.019G044200 1.0kb upstream 1.0kb upstream 7178 true Chr19: 5196252-5203429 Populus trichocarpa
Potri.019G044200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 5196252-5197251 Populus trichocarpa
Potri.019G044200 1.0kb downstream 1.0kb downstream 7178 true Chr19: 5197252-5204429 Populus trichocarpa
Potri.019G044200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 5203430-5204429 Populus trichocarpa
Potri.019G044200 2.0kb upstream 2.0kb upstream 8178 true Chr19: 5195252-5203429 Populus trichocarpa
Potri.019G044200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 5195252-5197251 Populus trichocarpa
Potri.019G044200 2.0kb downstream 2.0kb downstream 8178 true Chr19: 5197252-5205429 Populus trichocarpa
Potri.019G044200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 5203430-5205429 Populus trichocarpa
Potri.019G044200 5.0kb upstream 5.0kb upstream 11178 true Chr19: 5192252-5203429 Populus trichocarpa
Potri.019G044200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 5192252-5197251 Populus trichocarpa
Potri.019G044200 5.0kb downstream 5.0kb downstream 11178 true Chr19: 5197252-5208429 Populus trichocarpa
Potri.019G044200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 5203430-5208429 Populus trichocarpa
Potri.019G044200 10.0kb upstream 10.0kb upstream 16178 true Chr19: 5187252-5203429 Populus trichocarpa
Potri.019G044200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 5187252-5197251 Populus trichocarpa
Potri.019G044200 10.0kb downstream 10.0kb downstream 16178 true Chr19: 5197252-5213429 Populus trichocarpa
Potri.019G044200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 5203430-5213429 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460394 5262 Malpighiales View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain