Gene : orange1.1g007404m.g C. sinensis v1.1
Defline:  (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  11
Name:  ? orange1.1g007404m.g Secondary Identifier:  ? PAC:18110925
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g007404m.g 0.5kb upstream 0.5kb upstream 5062 true scaffold00238: 98095-103156 Citrus sinensis
orange1.1g007404m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00238: 98095-98594 Citrus sinensis
orange1.1g007404m.g 0.5kb downstream 0.5kb downstream 5062 true scaffold00238: 98595-103656 Citrus sinensis
orange1.1g007404m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00238: 103157-103656 Citrus sinensis
orange1.1g007404m.g 1.0kb upstream 1.0kb upstream 5562 true scaffold00238: 97595-103156 Citrus sinensis
orange1.1g007404m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00238: 97595-98594 Citrus sinensis
orange1.1g007404m.g 1.0kb downstream 1.0kb downstream 5562 true scaffold00238: 98595-104156 Citrus sinensis
orange1.1g007404m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00238: 103157-104156 Citrus sinensis
orange1.1g007404m.g 2.0kb upstream 2.0kb upstream 6562 true scaffold00238: 96595-103156 Citrus sinensis
orange1.1g007404m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00238: 96595-98594 Citrus sinensis
orange1.1g007404m.g 2.0kb downstream 2.0kb downstream 6562 true scaffold00238: 98595-105156 Citrus sinensis
orange1.1g007404m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00238: 103157-105156 Citrus sinensis
orange1.1g007404m.g 5.0kb upstream 5.0kb upstream 9562 true scaffold00238: 93595-103156 Citrus sinensis
orange1.1g007404m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00238: 93595-98594 Citrus sinensis
orange1.1g007404m.g 5.0kb downstream 5.0kb downstream 9562 true scaffold00238: 98595-108156 Citrus sinensis
orange1.1g007404m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00238: 103157-108156 Citrus sinensis
orange1.1g007404m.g 10.0kb upstream 10.0kb upstream 14562 true scaffold00238: 88595-103156 Citrus sinensis
orange1.1g007404m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00238: 88595-98594 Citrus sinensis
orange1.1g007404m.g 10.0kb downstream 10.0kb downstream 14562 true scaffold00238: 98595-113156 Citrus sinensis
orange1.1g007404m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00238: 103157-113156 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338334 5266 SBM View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain