Gene : Thhalv10007187m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  2411
Name:  ? Thhalv10007187m.g Secondary Identifier:  ? PAC:20187701
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10007187m.g 0.5kb upstream 0.5kb upstream 3779 true scaffold_5: 12884535-12888313 Eutrema salsugineum
Thhalv10007187m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12887814-12888313 Eutrema salsugineum
Thhalv10007187m.g 0.5kb downstream 0.5kb downstream 3779 true scaffold_5: 12884035-12887813 Eutrema salsugineum
Thhalv10007187m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12884035-12884534 Eutrema salsugineum
Thhalv10007187m.g 1.0kb upstream 1.0kb upstream 4279 true scaffold_5: 12884535-12888813 Eutrema salsugineum
Thhalv10007187m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12887814-12888813 Eutrema salsugineum
Thhalv10007187m.g 1.0kb downstream 1.0kb downstream 4279 true scaffold_5: 12883535-12887813 Eutrema salsugineum
Thhalv10007187m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12883535-12884534 Eutrema salsugineum
Thhalv10007187m.g 2.0kb upstream 2.0kb upstream 5279 true scaffold_5: 12884535-12889813 Eutrema salsugineum
Thhalv10007187m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12887814-12889813 Eutrema salsugineum
Thhalv10007187m.g 2.0kb downstream 2.0kb downstream 5279 true scaffold_5: 12882535-12887813 Eutrema salsugineum
Thhalv10007187m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12882535-12884534 Eutrema salsugineum
Thhalv10007187m.g 5.0kb upstream 5.0kb upstream 8279 true scaffold_5: 12884535-12892813 Eutrema salsugineum
Thhalv10007187m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12887814-12892813 Eutrema salsugineum
Thhalv10007187m.g 5.0kb downstream 5.0kb downstream 8279 true scaffold_5: 12879535-12887813 Eutrema salsugineum
Thhalv10007187m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12879535-12884534 Eutrema salsugineum
Thhalv10007187m.g 10.0kb upstream 10.0kb upstream 13279 true scaffold_5: 12884535-12897813 Eutrema salsugineum
Thhalv10007187m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12887814-12897813 Eutrema salsugineum
Thhalv10007187m.g 10.0kb downstream 10.0kb downstream 13279 true scaffold_5: 12874535-12887813 Eutrema salsugineum
Thhalv10007187m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12874535-12884534 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373414 5261 Brassicaceae View MSA
123827684 5264 Brassicales-Malvales View MSA
124338334 5266 SBM View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain