Gene : Bostr.25219s0090 B. stricta v1.2
Defline:  (1 of 7) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  90
Name:  ? Bostr.25219s0090 Secondary Identifier:  ? PAC:30671854
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.25219s0090 0.5kb upstream 0.5kb upstream 4154 true Scaffold25219: 436081-440234 Boechera stricta
Bostr.25219s0090 0.5kb upstream 0.5kb upstream 500 false Scaffold25219: 439735-440234 Boechera stricta
Bostr.25219s0090 0.5kb downstream 0.5kb downstream 4154 true Scaffold25219: 435581-439734 Boechera stricta
Bostr.25219s0090 0.5kb downstream 0.5kb downstream 500 false Scaffold25219: 435581-436080 Boechera stricta
Bostr.25219s0090 1.0kb upstream 1.0kb upstream 4654 true Scaffold25219: 436081-440734 Boechera stricta
Bostr.25219s0090 1.0kb upstream 1.0kb upstream 1000 false Scaffold25219: 439735-440734 Boechera stricta
Bostr.25219s0090 1.0kb downstream 1.0kb downstream 4654 true Scaffold25219: 435081-439734 Boechera stricta
Bostr.25219s0090 1.0kb downstream 1.0kb downstream 1000 false Scaffold25219: 435081-436080 Boechera stricta
Bostr.25219s0090 2.0kb upstream 2.0kb upstream 5654 true Scaffold25219: 436081-441734 Boechera stricta
Bostr.25219s0090 2.0kb upstream 2.0kb upstream 2000 false Scaffold25219: 439735-441734 Boechera stricta
Bostr.25219s0090 2.0kb downstream 2.0kb downstream 5654 true Scaffold25219: 434081-439734 Boechera stricta
Bostr.25219s0090 2.0kb downstream 2.0kb downstream 2000 false Scaffold25219: 434081-436080 Boechera stricta
Bostr.25219s0090 5.0kb upstream 5.0kb upstream 8654 true Scaffold25219: 436081-444734 Boechera stricta
Bostr.25219s0090 5.0kb upstream 5.0kb upstream 5000 false Scaffold25219: 439735-444734 Boechera stricta
Bostr.25219s0090 5.0kb downstream 5.0kb downstream 8654 true Scaffold25219: 431081-439734 Boechera stricta
Bostr.25219s0090 5.0kb downstream 5.0kb downstream 5000 false Scaffold25219: 431081-436080 Boechera stricta
Bostr.25219s0090 10.0kb upstream 10.0kb upstream 13654 true Scaffold25219: 436081-449734 Boechera stricta
Bostr.25219s0090 10.0kb upstream 10.0kb upstream 10000 false Scaffold25219: 439735-449734 Boechera stricta
Bostr.25219s0090 10.0kb downstream 10.0kb downstream 13654 true Scaffold25219: 426081-439734 Boechera stricta
Bostr.25219s0090 10.0kb downstream 10.0kb downstream 10000 false Scaffold25219: 426081-436080 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373414 5261 Brassicaceae View MSA
123827684 5264 Brassicales-Malvales View MSA
124338334 5266 SBM View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain