Gene : Potri.013G070500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO // SUBFAMILY NOT NAMED Genomic Order:  717
Name:  ? Potri.013G070500 Secondary Identifier:  ? PAC:37233745
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.013G070500 0.5kb upstream 0.5kb upstream 5253 true Chr13: 5888857-5894109 Populus trichocarpa
Potri.013G070500 0.5kb upstream 0.5kb upstream 500 false Chr13: 5893610-5894109 Populus trichocarpa
Potri.013G070500 0.5kb downstream 0.5kb downstream 5253 true Chr13: 5888357-5893609 Populus trichocarpa
Potri.013G070500 0.5kb downstream 0.5kb downstream 500 false Chr13: 5888357-5888856 Populus trichocarpa
Potri.013G070500 1.0kb upstream 1.0kb upstream 5753 true Chr13: 5888857-5894609 Populus trichocarpa
Potri.013G070500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 5893610-5894609 Populus trichocarpa
Potri.013G070500 1.0kb downstream 1.0kb downstream 5753 true Chr13: 5887857-5893609 Populus trichocarpa
Potri.013G070500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 5887857-5888856 Populus trichocarpa
Potri.013G070500 2.0kb upstream 2.0kb upstream 6753 true Chr13: 5888857-5895609 Populus trichocarpa
Potri.013G070500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 5893610-5895609 Populus trichocarpa
Potri.013G070500 2.0kb downstream 2.0kb downstream 6753 true Chr13: 5886857-5893609 Populus trichocarpa
Potri.013G070500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 5886857-5888856 Populus trichocarpa
Potri.013G070500 5.0kb upstream 5.0kb upstream 9753 true Chr13: 5888857-5898609 Populus trichocarpa
Potri.013G070500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 5893610-5898609 Populus trichocarpa
Potri.013G070500 5.0kb downstream 5.0kb downstream 9753 true Chr13: 5883857-5893609 Populus trichocarpa
Potri.013G070500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 5883857-5888856 Populus trichocarpa
Potri.013G070500 10.0kb upstream 10.0kb upstream 14753 true Chr13: 5888857-5903609 Populus trichocarpa
Potri.013G070500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 5893610-5903609 Populus trichocarpa
Potri.013G070500 10.0kb downstream 10.0kb downstream 14753 true Chr13: 5878857-5893609 Populus trichocarpa
Potri.013G070500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 5878857-5888856 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460394 5262 Malpighiales View MSA
124251670 5268 Malvidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain