Gene : Cagra.12113s0005 C. grandiflora v1.1
Defline:  (1 of 3) PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Genomic Order:  5
Name:  ? Cagra.12113s0005 Secondary Identifier:  ? PAC:28893530
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12113s0005 0.5kb upstream 0.5kb upstream 2544 true Scaffold12113: 13430-15973 Capsella grandiflora
Cagra.12113s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold12113: 13430-13929 Capsella grandiflora
Cagra.12113s0005 0.5kb downstream 0.5kb downstream 2544 true Scaffold12113: 13930-16473 Capsella grandiflora
Cagra.12113s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold12113: 15974-16473 Capsella grandiflora
Cagra.12113s0005 1.0kb upstream 1.0kb upstream 3044 true Scaffold12113: 12930-15973 Capsella grandiflora
Cagra.12113s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold12113: 12930-13929 Capsella grandiflora
Cagra.12113s0005 1.0kb downstream 1.0kb downstream 3044 true Scaffold12113: 13930-16973 Capsella grandiflora
Cagra.12113s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold12113: 15974-16973 Capsella grandiflora
Cagra.12113s0005 2.0kb upstream 2.0kb upstream 4044 true Scaffold12113: 11930-15973 Capsella grandiflora
Cagra.12113s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold12113: 11930-13929 Capsella grandiflora
Cagra.12113s0005 2.0kb downstream 2.0kb downstream 4044 true Scaffold12113: 13930-17973 Capsella grandiflora
Cagra.12113s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold12113: 15974-17973 Capsella grandiflora
Cagra.12113s0005 5.0kb upstream 5.0kb upstream 7044 true Scaffold12113: 8930-15973 Capsella grandiflora
Cagra.12113s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold12113: 8930-13929 Capsella grandiflora
Cagra.12113s0005 5.0kb downstream 5.0kb downstream 7044 true Scaffold12113: 13930-20973 Capsella grandiflora
Cagra.12113s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold12113: 15974-20973 Capsella grandiflora
Cagra.12113s0005 10.0kb upstream 10.0kb upstream 12044 true Scaffold12113: 3930-15973 Capsella grandiflora
Cagra.12113s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold12113: 3930-13929 Capsella grandiflora
Cagra.12113s0005 10.0kb downstream 10.0kb downstream 12044 true Scaffold12113: 13930-25973 Capsella grandiflora
Cagra.12113s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold12113: 15974-25973 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366376 5261 Brassicaceae View MSA
123837031 5264 Brassicales-Malvales View MSA
124339957 5266 SBM View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain