Gene : Cagra.2961s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11544 - COLD SHOCK DOMAIN CONTAINING PROTEINS Genomic Order:  9
Name:  ? Cagra.2961s0009 Secondary Identifier:  ? PAC:28897486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2961s0009 0.5kb upstream 0.5kb upstream 1094 true Scaffold2961: 25290-26383 Capsella grandiflora
Cagra.2961s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold2961: 25884-26383 Capsella grandiflora
Cagra.2961s0009 0.5kb downstream 0.5kb downstream 1094 true Scaffold2961: 24790-25883 Capsella grandiflora
Cagra.2961s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold2961: 24790-25289 Capsella grandiflora
Cagra.2961s0009 1.0kb upstream 1.0kb upstream 1594 true Scaffold2961: 25290-26883 Capsella grandiflora
Cagra.2961s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold2961: 25884-26883 Capsella grandiflora
Cagra.2961s0009 1.0kb downstream 1.0kb downstream 1594 true Scaffold2961: 24290-25883 Capsella grandiflora
Cagra.2961s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold2961: 24290-25289 Capsella grandiflora
Cagra.2961s0009 2.0kb upstream 2.0kb upstream 2594 true Scaffold2961: 25290-27883 Capsella grandiflora
Cagra.2961s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold2961: 25884-27883 Capsella grandiflora
Cagra.2961s0009 2.0kb downstream 2.0kb downstream 2594 true Scaffold2961: 23290-25883 Capsella grandiflora
Cagra.2961s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold2961: 23290-25289 Capsella grandiflora
Cagra.2961s0009 5.0kb upstream 5.0kb upstream 5594 true Scaffold2961: 25290-30883 Capsella grandiflora
Cagra.2961s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold2961: 25884-30883 Capsella grandiflora
Cagra.2961s0009 5.0kb downstream 5.0kb downstream 5594 true Scaffold2961: 20290-25883 Capsella grandiflora
Cagra.2961s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold2961: 20290-25289 Capsella grandiflora
Cagra.2961s0009 10.0kb upstream 10.0kb upstream 10594 true Scaffold2961: 25290-35883 Capsella grandiflora
Cagra.2961s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold2961: 25884-35883 Capsella grandiflora
Cagra.2961s0009 10.0kb downstream 10.0kb downstream 10594 true Scaffold2961: 15290-25883 Capsella grandiflora
Cagra.2961s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold2961: 15290-25289 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381528 5261 Brassicaceae View MSA
123835211 5264 Brassicales-Malvales View MSA
124339573 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain