Gene : Cagra.3126s0019 C. grandiflora v1.1
Defline:  (1 of 1) PF00098//PF00313//PF14392 - Zinc knuckle (zf-CCHC) // 'Cold-shock' DNA-binding domain (CSD) // Zinc knuckle (zf-CCHC_4) Genomic Order:  19
Name:  ? Cagra.3126s0019 Secondary Identifier:  ? PAC:28902414
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3126s0019 0.5kb upstream 0.5kb upstream 1433 true Scaffold3126: 76376-77808 Capsella grandiflora
Cagra.3126s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold3126: 77309-77808 Capsella grandiflora
Cagra.3126s0019 0.5kb downstream 0.5kb downstream 1433 true Scaffold3126: 75876-77308 Capsella grandiflora
Cagra.3126s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold3126: 75876-76375 Capsella grandiflora
Cagra.3126s0019 1.0kb upstream 1.0kb upstream 1933 true Scaffold3126: 76376-78308 Capsella grandiflora
Cagra.3126s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold3126: 77309-78308 Capsella grandiflora
Cagra.3126s0019 1.0kb downstream 1.0kb downstream 1933 true Scaffold3126: 75376-77308 Capsella grandiflora
Cagra.3126s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold3126: 75376-76375 Capsella grandiflora
Cagra.3126s0019 2.0kb upstream 2.0kb upstream 2933 true Scaffold3126: 76376-79308 Capsella grandiflora
Cagra.3126s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold3126: 77309-79308 Capsella grandiflora
Cagra.3126s0019 2.0kb downstream 2.0kb downstream 2933 true Scaffold3126: 74376-77308 Capsella grandiflora
Cagra.3126s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold3126: 74376-76375 Capsella grandiflora
Cagra.3126s0019 5.0kb upstream 5.0kb upstream 5933 true Scaffold3126: 76376-82308 Capsella grandiflora
Cagra.3126s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold3126: 77309-82308 Capsella grandiflora
Cagra.3126s0019 5.0kb downstream 5.0kb downstream 5933 true Scaffold3126: 71376-77308 Capsella grandiflora
Cagra.3126s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold3126: 71376-76375 Capsella grandiflora
Cagra.3126s0019 10.0kb upstream 10.0kb upstream 10933 true Scaffold3126: 76376-87308 Capsella grandiflora
Cagra.3126s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold3126: 77309-87308 Capsella grandiflora
Cagra.3126s0019 10.0kb downstream 10.0kb downstream 10933 true Scaffold3126: 66376-77308 Capsella grandiflora
Cagra.3126s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold3126: 66376-76375 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376203 5261 Brassicaceae View MSA
123837622 5264 Brassicales-Malvales View MSA
124338789 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain