Protein : Cagra.0922s0012.1.p C. grandiflora v1.1

Secondary Identifier:  PAC:28901620 Organism Name:  Capsella grandiflora
Length:  606   Name:  Cagra.0922s0012.1.p
Quick Links:
 
Quick Links:
 

Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

5 Protein Domains

DB identifier Type Name
IPR013708 Domain Shikimate dehydrogenase substrate binding, N-terminal
IPR001381 Family 3-dehydroquinate dehydratase type I
IPR011342 Family Shikimate dehydrogenase
IPR016040 Domain NAD(P)-binding domain
IPR006151 Domain Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.0922s0012.1_CDS 1821   Scaffold922: 37971-41030 Capsella grandiflora

30 Ontology Annotations

Ontology Term Db Gene/Protein Name
4.2.1.10 ENZYME Cagra.0922s0012.1.p
G3DSA:3.40.50.720 GENE3D Cagra.0922s0012.1.p
GO:0003855 GO Cagra.0922s0012.1.p
GO:0004764 GO Cagra.0922s0012.1.p
GO:0005737 GO Cagra.0922s0012.1.p
GO:0019632 GO Cagra.0922s0012.1.p
GO:0050661 GO Cagra.0922s0012.1.p
GO:0055114 GO Cagra.0922s0012.1.p
1.1.1.25 ENZYME Cagra.0922s0012.1.p
SHIKIMATE-5-DEHYDROGENASE-RXN METACYC Cagra.0922s0012.1.p
PTHR21089 PANTHER Cagra.0922s0012.1.p
PTHR21089:SF1 PANTHER Cagra.0922s0012.1.p
ARO-PWY Pathway Cagra.0922s0012.1.p
PWY-6163 Pathway Cagra.0922s0012.1.p
PF01487 PFAM Cagra.0922s0012.1.p
PF01488 PFAM Cagra.0922s0012.1.p
PF08501 PFAM Cagra.0922s0012.1.p
IPR001381 InterPro Cagra.0922s0012.1.p
IPR006151 InterPro Cagra.0922s0012.1.p
IPR011342 InterPro Cagra.0922s0012.1.p
IPR013708 InterPro Cagra.0922s0012.1.p
IPR016040 InterPro Cagra.0922s0012.1.p
K13832 KEGG Cagra.0922s0012.1.p
3-DEHYDROQUINATE-DEHYDRATASE-RXN METACYC Cagra.0922s0012.1.p
RXN-12131 METACYC Cagra.0922s0012.1.p
SSF51569 SSF Cagra.0922s0012.1.p
SSF51735 SSF Cagra.0922s0012.1.p
SSF53223 SSF Cagra.0922s0012.1.p
TIGR00507 TIGRFAMs Cagra.0922s0012.1.p
TIGR01093 TIGRFAMs Cagra.0922s0012.1.p

4 Pathway Components

Type Key Level Step
      20
      13
      27
      17

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6163 Capsella grandiflora pathologic