Protein : Cagra.8085s0003.2.p C. grandiflora v1.1

Secondary Identifier:  PAC:28906782 Organism Name:  Capsella grandiflora
Length:  1970   Name:  Cagra.8085s0003.2.p
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Proteins

9 Protein Domains

DB identifier Type Name
IPR012337 Domain Ribonuclease H-like domain
IPR000555 Domain JAB1/MPN/MOV34 metalloenzyme domain
IPR027652 Family Pre-mRNA-processing-splicing factor 8
IPR021983 Domain PRP8 domain IV core
IPR019582 Domain RNA recognition motif, spliceosomal PrP8
IPR019581 Domain Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR019580 Domain Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR012984 Domain PROCT domain
IPR012592 Domain PROCN domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Cagra.8085s0003.2_CDS 5913   Scaffold8085: 11256-17277 Capsella grandiflora

29 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0005515 GO Cagra.8085s0003.2.p
GO:0003723 GO Cagra.8085s0003.2.p
GO:0003676 GO Cagra.8085s0003.2.p
GO:0000398 GO Cagra.8085s0003.2.p
IPR019580 InterPro Cagra.8085s0003.2.p
IPR012984 InterPro Cagra.8085s0003.2.p
IPR012592 InterPro Cagra.8085s0003.2.p
IPR012337 InterPro Cagra.8085s0003.2.p
IPR000555 InterPro Cagra.8085s0003.2.p
GO:0030623 GO Cagra.8085s0003.2.p
GO:0017070 GO Cagra.8085s0003.2.p
GO:0005681 GO Cagra.8085s0003.2.p
PF01398 PFAM Cagra.8085s0003.2.p
PTHR11140:SF0 PANTHER Cagra.8085s0003.2.p
PTHR11140 PANTHER Cagra.8085s0003.2.p
K12856 KEGG Cagra.8085s0003.2.p
IPR027652 InterPro Cagra.8085s0003.2.p
IPR021983 InterPro Cagra.8085s0003.2.p
IPR019582 InterPro Cagra.8085s0003.2.p
IPR019581 InterPro Cagra.8085s0003.2.p
SSF102712 SSF Cagra.8085s0003.2.p
SM00232 SMART Cagra.8085s0003.2.p
PF12134 PFAM Cagra.8085s0003.2.p
PF10598 PFAM Cagra.8085s0003.2.p
PF10597 PFAM Cagra.8085s0003.2.p
PF10596 PFAM Cagra.8085s0003.2.p
PF08084 PFAM Cagra.8085s0003.2.p
PF08083 PFAM Cagra.8085s0003.2.p
SSF53098 SSF Cagra.8085s0003.2.p

0 Pathway Components

0 Pathways