Gene : gene33816-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 1) PF00665//PF13456 - Integrase core domain (rve) // Reverse transcriptase-like (RVT_3) Genomic Order:  1225
Name:  ? gene33816-v1.0-hybrid Secondary Identifier:  ? PAC:40687826
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene33816-v1.0-hybrid 0.5kb upstream 0.5kb upstream 2051 true Fvb4: 9519615-9521665 Fragaria vesca
gene33816-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb4: 9521166-9521665 Fragaria vesca
gene33816-v1.0-hybrid 0.5kb downstream 0.5kb downstream 2051 true Fvb4: 9519115-9521165 Fragaria vesca
gene33816-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb4: 9519115-9519614 Fragaria vesca
gene33816-v1.0-hybrid 1.0kb upstream 1.0kb upstream 2551 true Fvb4: 9519615-9522165 Fragaria vesca
gene33816-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb4: 9521166-9522165 Fragaria vesca
gene33816-v1.0-hybrid 1.0kb downstream 1.0kb downstream 2551 true Fvb4: 9518615-9521165 Fragaria vesca
gene33816-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb4: 9518615-9519614 Fragaria vesca
gene33816-v1.0-hybrid 2.0kb upstream 2.0kb upstream 3551 true Fvb4: 9519615-9523165 Fragaria vesca
gene33816-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb4: 9521166-9523165 Fragaria vesca
gene33816-v1.0-hybrid 2.0kb downstream 2.0kb downstream 3551 true Fvb4: 9517615-9521165 Fragaria vesca
gene33816-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb4: 9517615-9519614 Fragaria vesca
gene33816-v1.0-hybrid 5.0kb upstream 5.0kb upstream 6551 true Fvb4: 9519615-9526165 Fragaria vesca
gene33816-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb4: 9521166-9526165 Fragaria vesca
gene33816-v1.0-hybrid 5.0kb downstream 5.0kb downstream 6551 true Fvb4: 9514615-9521165 Fragaria vesca
gene33816-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb4: 9514615-9519614 Fragaria vesca
gene33816-v1.0-hybrid 10.0kb upstream 10.0kb upstream 11551 true Fvb4: 9519615-9531165 Fragaria vesca
gene33816-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb4: 9521166-9531165 Fragaria vesca
gene33816-v1.0-hybrid 10.0kb downstream 10.0kb downstream 11551 true Fvb4: 9509615-9521165 Fragaria vesca
gene33816-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb4: 9509615-9519614 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237403 5265 Fabidae View MSA
123983156 5270 Rosid View MSA
123753005 5271 Pentapetalae View MSA
122774912 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain