Gene : gene10543-v1.0-hybrid F. vesca v2.0.a2
Defline:  (1 of 2) PF00078//PF00665//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) Genomic Order:  2465
Name:  ? gene10543-v1.0-hybrid Secondary Identifier:  ? PAC:40670692
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene10543-v1.0-hybrid 0.5kb upstream 0.5kb upstream 3722 true Fvb5: 12465364-12469085 Fragaria vesca
gene10543-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb5: 12465364-12465863 Fragaria vesca
gene10543-v1.0-hybrid 0.5kb downstream 0.5kb downstream 3722 true Fvb5: 12465864-12469585 Fragaria vesca
gene10543-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb5: 12469086-12469585 Fragaria vesca
gene10543-v1.0-hybrid 1.0kb upstream 1.0kb upstream 4222 true Fvb5: 12464864-12469085 Fragaria vesca
gene10543-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb5: 12464864-12465863 Fragaria vesca
gene10543-v1.0-hybrid 1.0kb downstream 1.0kb downstream 4222 true Fvb5: 12465864-12470085 Fragaria vesca
gene10543-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb5: 12469086-12470085 Fragaria vesca
gene10543-v1.0-hybrid 2.0kb upstream 2.0kb upstream 5222 true Fvb5: 12463864-12469085 Fragaria vesca
gene10543-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb5: 12463864-12465863 Fragaria vesca
gene10543-v1.0-hybrid 2.0kb downstream 2.0kb downstream 5222 true Fvb5: 12465864-12471085 Fragaria vesca
gene10543-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb5: 12469086-12471085 Fragaria vesca
gene10543-v1.0-hybrid 5.0kb upstream 5.0kb upstream 8222 true Fvb5: 12460864-12469085 Fragaria vesca
gene10543-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb5: 12460864-12465863 Fragaria vesca
gene10543-v1.0-hybrid 5.0kb downstream 5.0kb downstream 8222 true Fvb5: 12465864-12474085 Fragaria vesca
gene10543-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb5: 12469086-12474085 Fragaria vesca
gene10543-v1.0-hybrid 10.0kb upstream 10.0kb upstream 13222 true Fvb5: 12455864-12469085 Fragaria vesca
gene10543-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb5: 12455864-12465863 Fragaria vesca
gene10543-v1.0-hybrid 10.0kb downstream 10.0kb downstream 13222 true Fvb5: 12465864-12479085 Fragaria vesca
gene10543-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb5: 12469086-12479085 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237441 5265 Fabidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain