Gene : gene29494-v1.0-hybrid F. vesca v2.0.a2

Defline:  (1 of 1) PTHR30603//PTHR30603:SF24 - RNA POLYMERASE SIGMA FACTOR RPO // RNA POLYMERASE SIGMA FACTOR SIGD, CHLOROPLASTIC Genomic Order:  413
Name:  ? gene29494-v1.0-hybrid Secondary Identifier:  ? PAC:40680866

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gene29494-v1.0-hybrid 0.5kb upstream 0.5kb upstream 2971 true Fvb7: 3731895-3734865 Fragaria vesca
gene29494-v1.0-hybrid 0.5kb upstream 0.5kb upstream 500 false Fvb7: 3734366-3734865 Fragaria vesca
gene29494-v1.0-hybrid 0.5kb downstream 0.5kb downstream 2971 true Fvb7: 3731395-3734365 Fragaria vesca
gene29494-v1.0-hybrid 0.5kb downstream 0.5kb downstream 500 false Fvb7: 3731395-3731894 Fragaria vesca
gene29494-v1.0-hybrid 1.0kb upstream 1.0kb upstream 3471 true Fvb7: 3731895-3735365 Fragaria vesca
gene29494-v1.0-hybrid 1.0kb upstream 1.0kb upstream 1000 false Fvb7: 3734366-3735365 Fragaria vesca
gene29494-v1.0-hybrid 1.0kb downstream 1.0kb downstream 3471 true Fvb7: 3730895-3734365 Fragaria vesca
gene29494-v1.0-hybrid 1.0kb downstream 1.0kb downstream 1000 false Fvb7: 3730895-3731894 Fragaria vesca
gene29494-v1.0-hybrid 2.0kb upstream 2.0kb upstream 4471 true Fvb7: 3731895-3736365 Fragaria vesca
gene29494-v1.0-hybrid 2.0kb upstream 2.0kb upstream 2000 false Fvb7: 3734366-3736365 Fragaria vesca
gene29494-v1.0-hybrid 2.0kb downstream 2.0kb downstream 4471 true Fvb7: 3729895-3734365 Fragaria vesca
gene29494-v1.0-hybrid 2.0kb downstream 2.0kb downstream 2000 false Fvb7: 3729895-3731894 Fragaria vesca
gene29494-v1.0-hybrid 5.0kb upstream 5.0kb upstream 7471 true Fvb7: 3731895-3739365 Fragaria vesca
gene29494-v1.0-hybrid 5.0kb upstream 5.0kb upstream 5000 false Fvb7: 3734366-3739365 Fragaria vesca
gene29494-v1.0-hybrid 5.0kb downstream 5.0kb downstream 7471 true Fvb7: 3726895-3734365 Fragaria vesca
gene29494-v1.0-hybrid 5.0kb downstream 5.0kb downstream 5000 false Fvb7: 3726895-3731894 Fragaria vesca
gene29494-v1.0-hybrid 10.0kb upstream 10.0kb upstream 12471 true Fvb7: 3731895-3744365 Fragaria vesca
gene29494-v1.0-hybrid 10.0kb upstream 10.0kb upstream 10000 false Fvb7: 3734366-3744365 Fragaria vesca
gene29494-v1.0-hybrid 10.0kb downstream 10.0kb downstream 12471 true Fvb7: 3721895-3734365 Fragaria vesca
gene29494-v1.0-hybrid 10.0kb downstream 10.0kb downstream 10000 false Fvb7: 3721895-3731894 Fragaria vesca

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311393 5265 Fabidae View MSA
124069263 5270 Rosid View MSA
123741916 5271 Pentapetalae View MSA
122770161 5272 Eudicot View MSA
122048895 5273 Angiosperm View MSA
121311156 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain