Gene : Brara.K01332 B. rapa FPsc v1.3
Defline:  (1 of 3) KOG3070 - Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing Genomic Order:  64
Name:  ? Brara.K01332 Secondary Identifier:  ? PAC:30623298
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01332 0.5kb upstream 0.5kb upstream 1271 true Scaffold58736: 583051-584321 Brassica rapa FPsc
Brara.K01332 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 583051-583550 Brassica rapa FPsc
Brara.K01332 0.5kb downstream 0.5kb downstream 1271 true Scaffold58736: 583551-584821 Brassica rapa FPsc
Brara.K01332 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 584322-584821 Brassica rapa FPsc
Brara.K01332 1.0kb upstream 1.0kb upstream 1771 true Scaffold58736: 582551-584321 Brassica rapa FPsc
Brara.K01332 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 582551-583550 Brassica rapa FPsc
Brara.K01332 1.0kb downstream 1.0kb downstream 1771 true Scaffold58736: 583551-585321 Brassica rapa FPsc
Brara.K01332 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 584322-585321 Brassica rapa FPsc
Brara.K01332 2.0kb upstream 2.0kb upstream 2771 true Scaffold58736: 581551-584321 Brassica rapa FPsc
Brara.K01332 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 581551-583550 Brassica rapa FPsc
Brara.K01332 2.0kb downstream 2.0kb downstream 2771 true Scaffold58736: 583551-586321 Brassica rapa FPsc
Brara.K01332 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 584322-586321 Brassica rapa FPsc
Brara.K01332 5.0kb upstream 5.0kb upstream 5771 true Scaffold58736: 578551-584321 Brassica rapa FPsc
Brara.K01332 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 578551-583550 Brassica rapa FPsc
Brara.K01332 5.0kb downstream 5.0kb downstream 5771 true Scaffold58736: 583551-589321 Brassica rapa FPsc
Brara.K01332 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 584322-589321 Brassica rapa FPsc
Brara.K01332 10.0kb upstream 10.0kb upstream 10771 true Scaffold58736: 573551-584321 Brassica rapa FPsc
Brara.K01332 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 573551-583550 Brassica rapa FPsc
Brara.K01332 10.0kb downstream 10.0kb downstream 10771 true Scaffold58736: 583551-594321 Brassica rapa FPsc
Brara.K01332 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 584322-594321 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365417 5261 Brassicaceae View MSA
123837622 5264 Brassicales-Malvales View MSA
124338789 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier