Gene : Bostr.12857s0001 B. stricta v1.2
Defline:  (1 of 5) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1
Name:  ? Bostr.12857s0001 Secondary Identifier:  ? PAC:30664889
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12857s0001 0.5kb upstream 0.5kb upstream 1244 true Scaffold12857: 151292-152535 Boechera stricta
Bostr.12857s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12857: 151292-151791 Boechera stricta
Bostr.12857s0001 0.5kb downstream 0.5kb downstream 1244 true Scaffold12857: 151792-153035 Boechera stricta
Bostr.12857s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12857: 152536-153035 Boechera stricta
Bostr.12857s0001 1.0kb upstream 1.0kb upstream 1744 true Scaffold12857: 150792-152535 Boechera stricta
Bostr.12857s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12857: 150792-151791 Boechera stricta
Bostr.12857s0001 1.0kb downstream 1.0kb downstream 1744 true Scaffold12857: 151792-153535 Boechera stricta
Bostr.12857s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12857: 152536-153535 Boechera stricta
Bostr.12857s0001 2.0kb upstream 2.0kb upstream 2744 true Scaffold12857: 149792-152535 Boechera stricta
Bostr.12857s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12857: 149792-151791 Boechera stricta
Bostr.12857s0001 2.0kb downstream 2.0kb downstream 2744 true Scaffold12857: 151792-154535 Boechera stricta
Bostr.12857s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold12857: 152536-154535 Boechera stricta
Bostr.12857s0001 5.0kb upstream 5.0kb upstream 5744 true Scaffold12857: 146792-152535 Boechera stricta
Bostr.12857s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12857: 146792-151791 Boechera stricta
Bostr.12857s0001 5.0kb downstream 5.0kb downstream 5744 true Scaffold12857: 151792-157535 Boechera stricta
Bostr.12857s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold12857: 152536-157535 Boechera stricta
Bostr.12857s0001 10.0kb upstream 10.0kb upstream 10744 true Scaffold12857: 141792-152535 Boechera stricta
Bostr.12857s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold12857: 141792-151791 Boechera stricta
Bostr.12857s0001 10.0kb downstream 10.0kb downstream 10744 true Scaffold12857: 151792-162535 Boechera stricta
Bostr.12857s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold12857: 152536-162535 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382232 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain