69 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| orange1.1g028119m.g | (1 of 1) PTHR11439//PTHR11439:SF196 - GAG-POL-RELATED RETROTRANSPOSON | C. sinensis v1.1 |
653
 |
scaffold00141: 216850-217502 | |
| AT1G21280 | (1 of 2) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | A. thaliana TAIR10 |
974
|
Chr1: 7447490-7448463 | |
| Thhalv10027425m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
720
|
scaffold_1: 14579309-14580028 | |
| Thhalv10017677m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
408
|
scaffold_10: 2652192-2652599 | |
| Thhalv10017718m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
788
|
scaffold_10: 4758984-4759771 | |
| Thhalv10002201m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
441
|
scaffold_12: 9883676-9884116 | |
| Thhalv10003354m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
1807
|
scaffold_17: 4031912-4033718 | |
| Thhalv10029155m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
900
|
scaffold_3: 6727859-6728758 | |
| Thhalv10029485m.g | (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | E. salsugineum v1.0 |
591
|
scaffold_3: 13297343-13297933 | |
| Thhalv10002805m.g | (1 of 6) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | E. salsugineum v1.0 |
791
|
scaffold_4: 5990204-5990994 | |
| Thhalv10003107m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
2121
|
scaffold_4: 11119405-11121525 | |
| Thhalv10003063m.g | (1 of 6) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON | E. salsugineum v1.0 |
1006
|
scaffold_4: 8110073-8111078 | |
| Thhalv10009346m.g | (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | E. salsugineum v1.0 |
816
|
scaffold_5: 6329119-6329934 | |
| Thhalv10009460m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
699
|
scaffold_5: 8084657-8085355 | |
| Thhalv10009474m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
558
|
scaffold_5: 8095669-8096226 | |
| Thhalv10012212m.g | (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | E. salsugineum v1.0 |
480
|
scaffold_7: 13132886-13133365 | |
| Thhalv10023972m.g | (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | E. salsugineum v1.0 |
594
|
scaffold_8: 4813153-4813746 | |
| Thhalv10019629m.g | (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | E. salsugineum v1.0 |
609
|
scaffold_9: 8278637-8279245 | |
| Ciclev10013723m.g | (1 of 12) 2.7.7.49 - RNA-directed DNA polymerase / Revertase | C. clementina v1.0 |
940
|
scaffold_6: 2129507-2130446 | |
| Ciclev10024522m.g | (1 of 24) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | C. clementina v1.0 |
738
|
scaffold_3: 24421500-24422237 | |
| Gorai.005G179300 | (1 of 12) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | G. raimondii v2.1 |
3666
|
Chr05: 52576139-52579804 | |
| Gorai.009G327600 | (1 of 12) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | G. raimondii v2.1 |
594
|
Chr09: 32923839-32924432 | |
| Thecc1EG002405 | Uncharacterized protein (26%U) | T. cacao v1.1 |
1871
|
scaffold_1: 13691410-13693280 | |
| Thecc1EG004883 | (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
1169
|
scaffold_1: 33930495-33931663 | |
| Thecc1EG010428 | (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
4485
|
scaffold_2: 33334303-33338787 | |
| Thecc1EG010591 | (1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED | T. cacao v1.1 |
1986
|
scaffold_2: 34419553-34421538 | |
| Thecc1EG014138 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
4446
|
scaffold_3: 20183721-20188166 | |
| Thecc1EG015127 | (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
2876
|
scaffold_3: 26345415-26348290 | |
| Thecc1EG019740 | (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
1473
|
scaffold_4: 24675140-24676612 | |
| Thecc1EG025058 | (1 of 47) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | T. cacao v1.1 |
2080
|
scaffold_5: 30410533-30412612 |
69 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| orange1.1g028119m | C. sinensis v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 1 | 5266 | SBM |
| Thhalv10017677m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10009474m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10009460m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10027425m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10002805m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10002201m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Ciclev10024522m | C. clementina v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 2 | 5266 | SBM |
| Thecc1EG004883t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Thecc1EG031460t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Thecc1EG015127t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Thecc1EG014138t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Thecc1EG033758t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Thecc1EG010428t1 | T. cacao v1.1 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 12 | 5266 | SBM |
| Bostr.27895s0081.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.3148s0254.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.2983s0182.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.12302s0117.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.26675s0018.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.26959s0302.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.26959s0315.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.18351s0363.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| Bostr.2066s0001.1.p | B. stricta v1.2 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 31 | 5266 | SBM |
| AT1G21280.1 | A. thaliana TAIR10 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 1 | 5266 | SBM |
| Thhalv10029485m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10003354m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10023972m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10003063m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10019629m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
| Thhalv10017718m | E. salsugineum v1.0 | 124350615 | PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) | 16 | 5266 | SBM |
