Gene : Thhalv10012212m.g E. salsugineum v1.0
Defline:  (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  1081
Name:  ? Thhalv10012212m.g Secondary Identifier:  ? PAC:20184539
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10012212m.g 0.5kb upstream 0.5kb upstream 980 true scaffold_7: 13132886-13133865 Eutrema salsugineum
Thhalv10012212m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13133366-13133865 Eutrema salsugineum
Thhalv10012212m.g 0.5kb downstream 0.5kb downstream 980 true scaffold_7: 13132386-13133365 Eutrema salsugineum
Thhalv10012212m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13132386-13132885 Eutrema salsugineum
Thhalv10012212m.g 1.0kb upstream 1.0kb upstream 1480 true scaffold_7: 13132886-13134365 Eutrema salsugineum
Thhalv10012212m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13133366-13134365 Eutrema salsugineum
Thhalv10012212m.g 1.0kb downstream 1.0kb downstream 1480 true scaffold_7: 13131886-13133365 Eutrema salsugineum
Thhalv10012212m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13131886-13132885 Eutrema salsugineum
Thhalv10012212m.g 2.0kb upstream 2.0kb upstream 2480 true scaffold_7: 13132886-13135365 Eutrema salsugineum
Thhalv10012212m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13133366-13135365 Eutrema salsugineum
Thhalv10012212m.g 2.0kb downstream 2.0kb downstream 2480 true scaffold_7: 13130886-13133365 Eutrema salsugineum
Thhalv10012212m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13130886-13132885 Eutrema salsugineum
Thhalv10012212m.g 5.0kb upstream 5.0kb upstream 5480 true scaffold_7: 13132886-13138365 Eutrema salsugineum
Thhalv10012212m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13133366-13138365 Eutrema salsugineum
Thhalv10012212m.g 5.0kb downstream 5.0kb downstream 5480 true scaffold_7: 13127886-13133365 Eutrema salsugineum
Thhalv10012212m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13127886-13132885 Eutrema salsugineum
Thhalv10012212m.g 10.0kb upstream 10.0kb upstream 10480 true scaffold_7: 13132886-13143365 Eutrema salsugineum
Thhalv10012212m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13133366-13143365 Eutrema salsugineum
Thhalv10012212m.g 10.0kb downstream 10.0kb downstream 10480 true scaffold_7: 13122886-13133365 Eutrema salsugineum
Thhalv10012212m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13122886-13132885 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382232 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain