Gene : Thhalv10027425m.g E. salsugineum v1.0
Defline:  (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  2814
Name:  ? Thhalv10027425m.g Secondary Identifier:  ? PAC:20195222
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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10027425m.g 0.5kb upstream 0.5kb upstream 1220 true scaffold_1: 14578809-14580028 Eutrema salsugineum
Thhalv10027425m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14578809-14579308 Eutrema salsugineum
Thhalv10027425m.g 0.5kb downstream 0.5kb downstream 1220 true scaffold_1: 14579309-14580528 Eutrema salsugineum
Thhalv10027425m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14580029-14580528 Eutrema salsugineum
Thhalv10027425m.g 1.0kb upstream 1.0kb upstream 1720 true scaffold_1: 14578309-14580028 Eutrema salsugineum
Thhalv10027425m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14578309-14579308 Eutrema salsugineum
Thhalv10027425m.g 1.0kb downstream 1.0kb downstream 1720 true scaffold_1: 14579309-14581028 Eutrema salsugineum
Thhalv10027425m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14580029-14581028 Eutrema salsugineum
Thhalv10027425m.g 2.0kb upstream 2.0kb upstream 2720 true scaffold_1: 14577309-14580028 Eutrema salsugineum
Thhalv10027425m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14577309-14579308 Eutrema salsugineum
Thhalv10027425m.g 2.0kb downstream 2.0kb downstream 2720 true scaffold_1: 14579309-14582028 Eutrema salsugineum
Thhalv10027425m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14580029-14582028 Eutrema salsugineum
Thhalv10027425m.g 5.0kb upstream 5.0kb upstream 5720 true scaffold_1: 14574309-14580028 Eutrema salsugineum
Thhalv10027425m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14574309-14579308 Eutrema salsugineum
Thhalv10027425m.g 5.0kb downstream 5.0kb downstream 5720 true scaffold_1: 14579309-14585028 Eutrema salsugineum
Thhalv10027425m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14580029-14585028 Eutrema salsugineum
Thhalv10027425m.g 10.0kb upstream 10.0kb upstream 10720 true scaffold_1: 14569309-14580028 Eutrema salsugineum
Thhalv10027425m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14569309-14579308 Eutrema salsugineum
Thhalv10027425m.g 10.0kb downstream 10.0kb downstream 10720 true scaffold_1: 14579309-14590028 Eutrema salsugineum
Thhalv10027425m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14580029-14590028 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382232 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain