Gene : Thhalv10017677m.g E. salsugineum v1.0
Defline:  (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  51
Name:  ? Thhalv10017677m.g Secondary Identifier:  ? PAC:20179537
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10017677m.g 0.5kb upstream 0.5kb upstream 908 true scaffold_10: 2652192-2653099 Eutrema salsugineum
Thhalv10017677m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_10: 2652600-2653099 Eutrema salsugineum
Thhalv10017677m.g 0.5kb downstream 0.5kb downstream 908 true scaffold_10: 2651692-2652599 Eutrema salsugineum
Thhalv10017677m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_10: 2651692-2652191 Eutrema salsugineum
Thhalv10017677m.g 1.0kb upstream 1.0kb upstream 1408 true scaffold_10: 2652192-2653599 Eutrema salsugineum
Thhalv10017677m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_10: 2652600-2653599 Eutrema salsugineum
Thhalv10017677m.g 1.0kb downstream 1.0kb downstream 1408 true scaffold_10: 2651192-2652599 Eutrema salsugineum
Thhalv10017677m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_10: 2651192-2652191 Eutrema salsugineum
Thhalv10017677m.g 2.0kb upstream 2.0kb upstream 2408 true scaffold_10: 2652192-2654599 Eutrema salsugineum
Thhalv10017677m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_10: 2652600-2654599 Eutrema salsugineum
Thhalv10017677m.g 2.0kb downstream 2.0kb downstream 2408 true scaffold_10: 2650192-2652599 Eutrema salsugineum
Thhalv10017677m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_10: 2650192-2652191 Eutrema salsugineum
Thhalv10017677m.g 5.0kb upstream 5.0kb upstream 5408 true scaffold_10: 2652192-2657599 Eutrema salsugineum
Thhalv10017677m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_10: 2652600-2657599 Eutrema salsugineum
Thhalv10017677m.g 5.0kb downstream 5.0kb downstream 5408 true scaffold_10: 2647192-2652599 Eutrema salsugineum
Thhalv10017677m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_10: 2647192-2652191 Eutrema salsugineum
Thhalv10017677m.g 10.0kb upstream 10.0kb upstream 10408 true scaffold_10: 2652192-2662599 Eutrema salsugineum
Thhalv10017677m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_10: 2652600-2662599 Eutrema salsugineum
Thhalv10017677m.g 10.0kb downstream 10.0kb downstream 10408 true scaffold_10: 2642192-2652599 Eutrema salsugineum
Thhalv10017677m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_10: 2642192-2652191 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122382232 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain