Gene : Thhalv10009474m.g E. salsugineum v1.0
Defline:  (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1212
Name:  ? Thhalv10009474m.g Secondary Identifier:  ? PAC:20186040
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10009474m.g 0.5kb upstream 0.5kb upstream 1058 true scaffold_5: 8095169-8096226 Eutrema salsugineum
Thhalv10009474m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 8095169-8095668 Eutrema salsugineum
Thhalv10009474m.g 0.5kb downstream 0.5kb downstream 1058 true scaffold_5: 8095669-8096726 Eutrema salsugineum
Thhalv10009474m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 8096227-8096726 Eutrema salsugineum
Thhalv10009474m.g 1.0kb upstream 1.0kb upstream 1558 true scaffold_5: 8094669-8096226 Eutrema salsugineum
Thhalv10009474m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 8094669-8095668 Eutrema salsugineum
Thhalv10009474m.g 1.0kb downstream 1.0kb downstream 1558 true scaffold_5: 8095669-8097226 Eutrema salsugineum
Thhalv10009474m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 8096227-8097226 Eutrema salsugineum
Thhalv10009474m.g 2.0kb upstream 2.0kb upstream 2558 true scaffold_5: 8093669-8096226 Eutrema salsugineum
Thhalv10009474m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 8093669-8095668 Eutrema salsugineum
Thhalv10009474m.g 2.0kb downstream 2.0kb downstream 2558 true scaffold_5: 8095669-8098226 Eutrema salsugineum
Thhalv10009474m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 8096227-8098226 Eutrema salsugineum
Thhalv10009474m.g 5.0kb upstream 5.0kb upstream 5558 true scaffold_5: 8090669-8096226 Eutrema salsugineum
Thhalv10009474m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 8090669-8095668 Eutrema salsugineum
Thhalv10009474m.g 5.0kb downstream 5.0kb downstream 5558 true scaffold_5: 8095669-8101226 Eutrema salsugineum
Thhalv10009474m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 8096227-8101226 Eutrema salsugineum
Thhalv10009474m.g 10.0kb upstream 10.0kb upstream 10558 true scaffold_5: 8085669-8096226 Eutrema salsugineum
Thhalv10009474m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 8085669-8095668 Eutrema salsugineum
Thhalv10009474m.g 10.0kb downstream 10.0kb downstream 10558 true scaffold_5: 8095669-8106226 Eutrema salsugineum
Thhalv10009474m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 8096227-8106226 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380801 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain