Protein Family : PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 122380801

Method ID:  5261 Method Name:  Brassicaceae
Sequence Alignment:  View MSA Member Count:  8

8 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT1G21280 (1 of 2) PF03732 - Retrotransposon gag protein (Retrotrans_gag) A. thaliana TAIR10 974   Chr1: 7447490-7448463
Thhalv10009460m.g (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) E. salsugineum v1.0 699   scaffold_5: 8084657-8085355
Thhalv10009474m.g (1 of 17) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) E. salsugineum v1.0 558   scaffold_5: 8095669-8096226
Cagra.1632s0018 (1 of 7) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) C. grandiflora v1.1 873   Scaffold1632: 69150-70022
Brara.F01523 (1 of 5) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) B. rapa FPsc v1.3 942   A06: 8954070-8955011
Bostr.25570s0003 (1 of 8) PF03732 - Retrotransposon gag protein (Retrotrans_gag) B. stricta v1.2 1004   Scaffold25570: 10144-11147
AL1G34380 (1 of 8) PF03732 - Retrotransposon gag protein (Retrotrans_gag) A. lyrata v2.1 2205   scaffold_1: 9176948-9179152
AL1G34370 (1 of 1) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED A. lyrata v2.1 938   scaffold_1: 9172625-9173562

8 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10009460m E. salsugineum v1.0 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5261 Brassicaceae
AT1G21280.1 A. thaliana TAIR10 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 1 5261 Brassicaceae
Thhalv10009474m E. salsugineum v1.0 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5261 Brassicaceae
Cagra.1632s0018.1.p C. grandiflora v1.1 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 1 5261 Brassicaceae
Brara.F01523.1.p B. rapa FPsc v1.3 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 1 5261 Brassicaceae
Bostr.25570s0003.1.p B. stricta v1.2 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 1 5261 Brassicaceae
AL1G34380.t1 A. lyrata v2.1 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5261 Brassicaceae
AL1G34370.t1 A. lyrata v2.1 122380801 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED 2 5261 Brassicaceae