Gene : AL1G34380 A. lyrata v2.1
Defline:  (1 of 8) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  2307
Name:  ? AL1G34380 Secondary Identifier:  ? PAC:35931264
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL1G34380 0.5kb upstream 0.5kb upstream 2705   true scaffold_1: 9176948-9179652 Arabidopsis lyrata
AL1G34380 0.5kb upstream 0.5kb upstream 500   false scaffold_1: 9179153-9179652 Arabidopsis lyrata
AL1G34380 0.5kb downstream 0.5kb downstream 2705   true scaffold_1: 9176448-9179152 Arabidopsis lyrata
AL1G34380 0.5kb downstream 0.5kb downstream 500   false scaffold_1: 9176448-9176947 Arabidopsis lyrata
AL1G34380 1.0kb upstream 1.0kb upstream 3205   true scaffold_1: 9176948-9180152 Arabidopsis lyrata
AL1G34380 1.0kb upstream 1.0kb upstream 1000   false scaffold_1: 9179153-9180152 Arabidopsis lyrata
AL1G34380 1.0kb downstream 1.0kb downstream 3205   true scaffold_1: 9175948-9179152 Arabidopsis lyrata
AL1G34380 1.0kb downstream 1.0kb downstream 1000   false scaffold_1: 9175948-9176947 Arabidopsis lyrata
AL1G34380 2.0kb upstream 2.0kb upstream 4205   true scaffold_1: 9176948-9181152 Arabidopsis lyrata
AL1G34380 2.0kb upstream 2.0kb upstream 2000   false scaffold_1: 9179153-9181152 Arabidopsis lyrata
AL1G34380 2.0kb downstream 2.0kb downstream 4205   true scaffold_1: 9174948-9179152 Arabidopsis lyrata
AL1G34380 2.0kb downstream 2.0kb downstream 2000   false scaffold_1: 9174948-9176947 Arabidopsis lyrata
AL1G34380 5.0kb upstream 5.0kb upstream 7205   true scaffold_1: 9176948-9184152 Arabidopsis lyrata
AL1G34380 5.0kb upstream 5.0kb upstream 5000   false scaffold_1: 9179153-9184152 Arabidopsis lyrata
AL1G34380 5.0kb downstream 5.0kb downstream 7205   true scaffold_1: 9171948-9179152 Arabidopsis lyrata
AL1G34380 5.0kb downstream 5.0kb downstream 5000   false scaffold_1: 9171948-9176947 Arabidopsis lyrata
AL1G34380 10.0kb upstream 10.0kb upstream 12205   true scaffold_1: 9176948-9189152 Arabidopsis lyrata
AL1G34380 10.0kb upstream 10.0kb upstream 10000   false scaffold_1: 9179153-9189152 Arabidopsis lyrata
AL1G34380 10.0kb downstream 10.0kb downstream 12205   true scaffold_1: 9166948-9179152 Arabidopsis lyrata
AL1G34380 10.0kb downstream 10.0kb downstream 10000   false scaffold_1: 9166948-9176947 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380801 5261 Brassicaceae View MSA
123841248 5264 Brassicales-Malvales View MSA
124350615 5266 SBM View MSA
124253184 5268 Malvidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain