Gene : Cucsa.362600 C. sativus v1.0
Defline:  (1 of 1) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  58
Name:  ? Cucsa.362600 Secondary Identifier:  ? PAC:16980950
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.362600 0.5kb upstream 0.5kb upstream 5153 true scaffold03611: 407067-412219 Cucumis sativus
Cucsa.362600 0.5kb upstream 0.5kb upstream 500 false scaffold03611: 407067-407566 Cucumis sativus
Cucsa.362600 0.5kb downstream 0.5kb downstream 5153 true scaffold03611: 407567-412719 Cucumis sativus
Cucsa.362600 0.5kb downstream 0.5kb downstream 500 false scaffold03611: 412220-412719 Cucumis sativus
Cucsa.362600 1.0kb upstream 1.0kb upstream 5653 true scaffold03611: 406567-412219 Cucumis sativus
Cucsa.362600 1.0kb upstream 1.0kb upstream 1000 false scaffold03611: 406567-407566 Cucumis sativus
Cucsa.362600 1.0kb downstream 1.0kb downstream 5653 true scaffold03611: 407567-413219 Cucumis sativus
Cucsa.362600 1.0kb downstream 1.0kb downstream 1000 false scaffold03611: 412220-413219 Cucumis sativus
Cucsa.362600 2.0kb upstream 2.0kb upstream 6653 true scaffold03611: 405567-412219 Cucumis sativus
Cucsa.362600 2.0kb upstream 2.0kb upstream 2000 false scaffold03611: 405567-407566 Cucumis sativus
Cucsa.362600 2.0kb downstream 2.0kb downstream 6653 true scaffold03611: 407567-414219 Cucumis sativus
Cucsa.362600 2.0kb downstream 2.0kb downstream 2000 false scaffold03611: 412220-414219 Cucumis sativus
Cucsa.362600 5.0kb upstream 5.0kb upstream 9653 true scaffold03611: 402567-412219 Cucumis sativus
Cucsa.362600 5.0kb upstream 5.0kb upstream 5000 false scaffold03611: 402567-407566 Cucumis sativus
Cucsa.362600 5.0kb downstream 5.0kb downstream 9653 true scaffold03611: 407567-417219 Cucumis sativus
Cucsa.362600 5.0kb downstream 5.0kb downstream 5000 false scaffold03611: 412220-417219 Cucumis sativus
Cucsa.362600 10.0kb upstream 10.0kb upstream 14653 true scaffold03611: 397567-412219 Cucumis sativus
Cucsa.362600 10.0kb upstream 10.0kb upstream 10000 false scaffold03611: 397567-407566 Cucumis sativus
Cucsa.362600 10.0kb downstream 10.0kb downstream 14653 true scaffold03611: 407567-422219 Cucumis sativus
Cucsa.362600 10.0kb downstream 10.0kb downstream 10000 false scaffold03611: 412220-422219 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310263 5265 Fabidae View MSA
124065306 5270 Rosid View MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain