Gene : Cucsa.212270 C. sativus v1.0
Defline:  (1 of 9) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN Genomic Order:  8
Name:  ? Cucsa.212270 Secondary Identifier:  ? PAC:16969317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.212270 0.5kb upstream 0.5kb upstream 3318 true scaffold01543: 62475-65792 Cucumis sativus
Cucsa.212270 0.5kb upstream 0.5kb upstream 500 false scaffold01543: 62475-62974 Cucumis sativus
Cucsa.212270 0.5kb downstream 0.5kb downstream 3318 true scaffold01543: 62975-66292 Cucumis sativus
Cucsa.212270 0.5kb downstream 0.5kb downstream 500 false scaffold01543: 65793-66292 Cucumis sativus
Cucsa.212270 1.0kb upstream 1.0kb upstream 3818 true scaffold01543: 61975-65792 Cucumis sativus
Cucsa.212270 1.0kb upstream 1.0kb upstream 1000 false scaffold01543: 61975-62974 Cucumis sativus
Cucsa.212270 1.0kb downstream 1.0kb downstream 3818 true scaffold01543: 62975-66792 Cucumis sativus
Cucsa.212270 1.0kb downstream 1.0kb downstream 1000 false scaffold01543: 65793-66792 Cucumis sativus
Cucsa.212270 2.0kb upstream 2.0kb upstream 4818 true scaffold01543: 60975-65792 Cucumis sativus
Cucsa.212270 2.0kb upstream 2.0kb upstream 2000 false scaffold01543: 60975-62974 Cucumis sativus
Cucsa.212270 2.0kb downstream 2.0kb downstream 4818 true scaffold01543: 62975-67792 Cucumis sativus
Cucsa.212270 2.0kb downstream 2.0kb downstream 2000 false scaffold01543: 65793-67792 Cucumis sativus
Cucsa.212270 5.0kb upstream 5.0kb upstream 7818 true scaffold01543: 57975-65792 Cucumis sativus
Cucsa.212270 5.0kb upstream 5.0kb upstream 5000 false scaffold01543: 57975-62974 Cucumis sativus
Cucsa.212270 5.0kb downstream 5.0kb downstream 7818 true scaffold01543: 62975-70792 Cucumis sativus
Cucsa.212270 5.0kb downstream 5.0kb downstream 5000 false scaffold01543: 65793-70792 Cucumis sativus
Cucsa.212270 10.0kb upstream 10.0kb upstream 12818 true scaffold01543: 52975-65792 Cucumis sativus
Cucsa.212270 10.0kb upstream 10.0kb upstream 10000 false scaffold01543: 52975-62974 Cucumis sativus
Cucsa.212270 10.0kb downstream 10.0kb downstream 12818 true scaffold01543: 62975-75792 Cucumis sativus
Cucsa.212270 10.0kb downstream 10.0kb downstream 10000 false scaffold01543: 65793-75792 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237441 5265 Fabidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain