Gene : Medtr1g032710 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR23079:SF9 - RNA-DEPENDENT RNA POLYMERASE 1 Description:  RNA-dependent RNA polymerase family protein
Genomic Order:  1556 Name:  ? Medtr1g032710
Secondary Identifier:  ? PAC:31092577
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g032710 0.5kb upstream 0.5kb upstream 2726 true chr1: 11674944-11677669 Medicago truncatula
Medtr1g032710 0.5kb upstream 0.5kb upstream 500 false chr1: 11677170-11677669 Medicago truncatula
Medtr1g032710 0.5kb downstream 0.5kb downstream 2726 true chr1: 11674444-11677169 Medicago truncatula
Medtr1g032710 0.5kb downstream 0.5kb downstream 500 false chr1: 11674444-11674943 Medicago truncatula
Medtr1g032710 1.0kb upstream 1.0kb upstream 3226 true chr1: 11674944-11678169 Medicago truncatula
Medtr1g032710 1.0kb upstream 1.0kb upstream 1000 false chr1: 11677170-11678169 Medicago truncatula
Medtr1g032710 1.0kb downstream 1.0kb downstream 3226 true chr1: 11673944-11677169 Medicago truncatula
Medtr1g032710 1.0kb downstream 1.0kb downstream 1000 false chr1: 11673944-11674943 Medicago truncatula
Medtr1g032710 2.0kb upstream 2.0kb upstream 4226 true chr1: 11674944-11679169 Medicago truncatula
Medtr1g032710 2.0kb upstream 2.0kb upstream 2000 false chr1: 11677170-11679169 Medicago truncatula
Medtr1g032710 2.0kb downstream 2.0kb downstream 4226 true chr1: 11672944-11677169 Medicago truncatula
Medtr1g032710 2.0kb downstream 2.0kb downstream 2000 false chr1: 11672944-11674943 Medicago truncatula
Medtr1g032710 5.0kb upstream 5.0kb upstream 7226 true chr1: 11674944-11682169 Medicago truncatula
Medtr1g032710 5.0kb upstream 5.0kb upstream 5000 false chr1: 11677170-11682169 Medicago truncatula
Medtr1g032710 5.0kb downstream 5.0kb downstream 7226 true chr1: 11669944-11677169 Medicago truncatula
Medtr1g032710 5.0kb downstream 5.0kb downstream 5000 false chr1: 11669944-11674943 Medicago truncatula
Medtr1g032710 10.0kb upstream 10.0kb upstream 12226 true chr1: 11674944-11687169 Medicago truncatula
Medtr1g032710 10.0kb upstream 10.0kb upstream 10000 false chr1: 11677170-11687169 Medicago truncatula
Medtr1g032710 10.0kb downstream 10.0kb downstream 12226 true chr1: 11664944-11677169 Medicago truncatula
Medtr1g032710 10.0kb downstream 10.0kb downstream 10000 false chr1: 11664944-11674943 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311873 5265 Fabidae View MSA
124050822 5270 Rosid View MSA
123752294 5271 Pentapetalae View MSA
122797649 5272 Eudicot View MSA
122047757 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.755       High
cufflinks 0.038     Low  
cufflinks 0.024     Low  
cufflinks 0.031     Low  
cufflinks 0.298        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.03     Low  
cufflinks 0.294        

0 Strain