Gene : SapurV1A.7273s0010 S. purpurea v1.0

Defline:  (1 of 323) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1
Name:  ? SapurV1A.7273s0010 Secondary Identifier:  ? PAC:31455201

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.7273s0010 0.5kb upstream 0.5kb upstream 1347 true Scaffold7273: 290-1636 Salix purpurea
SapurV1A.7273s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold7273: 1137-1636 Salix purpurea
SapurV1A.7273s0010 0.5kb downstream 0.5kb downstream 1136 true Scaffold7273: 1-1136 Salix purpurea
SapurV1A.7273s0010 0.5kb downstream 0.5kb downstream 289 false Scaffold7273: 1-289 Salix purpurea
SapurV1A.7273s0010 1.0kb upstream 1.0kb upstream 1605 true Scaffold7273: 290-1894 Salix purpurea
SapurV1A.7273s0010 1.0kb upstream 1.0kb upstream 758 false Scaffold7273: 1137-1894 Salix purpurea
SapurV1A.7273s0010 1.0kb downstream 1.0kb downstream 1136 true Scaffold7273: 1-1136 Salix purpurea
SapurV1A.7273s0010 1.0kb downstream 1.0kb downstream 289 false Scaffold7273: 1-289 Salix purpurea
SapurV1A.7273s0010 2.0kb upstream 2.0kb upstream 1605 true Scaffold7273: 290-1894 Salix purpurea
SapurV1A.7273s0010 2.0kb upstream 2.0kb upstream 758 false Scaffold7273: 1137-1894 Salix purpurea
SapurV1A.7273s0010 2.0kb downstream 2.0kb downstream 1136 true Scaffold7273: 1-1136 Salix purpurea
SapurV1A.7273s0010 2.0kb downstream 2.0kb downstream 289 false Scaffold7273: 1-289 Salix purpurea
SapurV1A.7273s0010 5.0kb upstream 5.0kb upstream 1605 true Scaffold7273: 290-1894 Salix purpurea
SapurV1A.7273s0010 5.0kb upstream 5.0kb upstream 758 false Scaffold7273: 1137-1894 Salix purpurea
SapurV1A.7273s0010 5.0kb downstream 5.0kb downstream 1136 true Scaffold7273: 1-1136 Salix purpurea
SapurV1A.7273s0010 5.0kb downstream 5.0kb downstream 289 false Scaffold7273: 1-289 Salix purpurea
SapurV1A.7273s0010 10.0kb upstream 10.0kb upstream 1605 true Scaffold7273: 290-1894 Salix purpurea
SapurV1A.7273s0010 10.0kb upstream 10.0kb upstream 758 false Scaffold7273: 1137-1894 Salix purpurea
SapurV1A.7273s0010 10.0kb downstream 10.0kb downstream 1136 true Scaffold7273: 1-1136 Salix purpurea
SapurV1A.7273s0010 10.0kb downstream 10.0kb downstream 289 false Scaffold7273: 1-289 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461179 5262 Malpighiales View MSA
124250181 5268 Malvidae View MSA
124065859 5270 Rosid View MSA
123753688 5271 Pentapetalae View MSA
122793597 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain