GO Term : GO:0030904 retromer complex GO

Namespace:  cellular_component Obsolete:  false
description  A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

10158 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0030904 167991  
OntologyAnnotation GO:0030904 167991 GO
GOAnnotation GO:0030904 evm.TU.supercontig_12.274  
OntologyAnnotation GO:0030904 evm.model.supercontig_12.274 GO
OntologyAnnotation GO:0030904 evm.model.supercontig_26.302 GO
GOAnnotation GO:0030904 evm.TU.supercontig_26.302  
OntologyAnnotation GO:0030904 evm.model.supercontig_6.289 GO
GOAnnotation GO:0030904 evm.TU.supercontig_6.289  
GOAnnotation GO:0030904 28962.t000027  
OntologyAnnotation GO:0030904 28962.m000458 GO
GOAnnotation GO:0030904 29762.t000002  
OntologyAnnotation GO:0030904 29762.m000474 GO
GOAnnotation GO:0030904 30170.t000203  
OntologyAnnotation GO:0030904 30170.m013791 GO
GOAnnotation GO:0030904 Cucsa.007360  
OntologyAnnotation GO:0030904 Cucsa.007360.1 GO
GOAnnotation GO:0030904 Cucsa.322760  
OntologyAnnotation GO:0030904 Cucsa.322760.1 GO
OntologyAnnotation GO:0030904 Cucsa.322760.2 GO
OntologyAnnotation GO:0030904 Cucsa.343140.1 GO
GOAnnotation GO:0030904 Cucsa.343140  
OntologyAnnotation GO:0030904 orange1.1g036120m GO
GOAnnotation GO:0030904 orange1.1g036120m.g  
OntologyAnnotation GO:0030904 orange1.1g009970m GO
OntologyAnnotation GO:0030904 orange1.1g005527m GO
OntologyAnnotation GO:0030904 orange1.1g005535m GO
OntologyAnnotation GO:0030904 orange1.1g005113m GO
OntologyAnnotation GO:0030904 orange1.1g004965m GO
OntologyAnnotation GO:0030904 orange1.1g003862m GO
OntologyAnnotation GO:0030904 orange1.1g003856m GO

10 Parents

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0043234 protein complex A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
GO:0030904 retromer complex A conserved hetero-pentameric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. The budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p. The mammalian complex shows slight variation in composition compared to yeast, and comprises SNX1 or SNX2, SNX5 or SNX6, VPS26A or VPS26B, VPS29, and VPS35.
GO:0044464 cell part Any constituent part of a cell, the basic structural and functional unit of all organisms.
GO:0032991 macromolecular complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
GO:0005575 cellular_component The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
GO:0005623 cell The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
GO:0098796 membrane protein complex Any protein complex that is part of a membrane.
GO:0044425 membrane part Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO:0012505 endomembrane system A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.

13 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0098796 GO:0030904
part of GO:0012505 GO:0030904
is_a GO:0044464 GO:0030904
part of GO:0044464 GO:0030904
is_a GO:0032991 GO:0030904
part of GO:0005575 GO:0030904
part of GO:0005623 GO:0030904
is_a GO:0043234 GO:0030904
part of GO:0016020 GO:0030904
is_a GO:0005575 GO:0030904
is_a GO:0044425 GO:0030904
part of GO:0030904 GO:0030905
part of GO:0030904 GO:0030906

0 Synonyms