Gene : Eucgr.D00342 E. grandis v2.0
Defline:  (1 of 2) PTHR24423:SF563 - PHYTOCHROME E Genomic Order:  273
Name:  ? Eucgr.D00342 Secondary Identifier:  ? PAC:32052121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.D00342 0.5kb upstream 0.5kb upstream 8017 true Chr04: 5912708-5920724 Eucalyptus grandis
Eucgr.D00342 0.5kb upstream 0.5kb upstream 500 false Chr04: 5912708-5913207 Eucalyptus grandis
Eucgr.D00342 0.5kb downstream 0.5kb downstream 8017 true Chr04: 5913208-5921224 Eucalyptus grandis
Eucgr.D00342 0.5kb downstream 0.5kb downstream 500 false Chr04: 5920725-5921224 Eucalyptus grandis
Eucgr.D00342 1.0kb upstream 1.0kb upstream 8517 true Chr04: 5912208-5920724 Eucalyptus grandis
Eucgr.D00342 1.0kb upstream 1.0kb upstream 1000 false Chr04: 5912208-5913207 Eucalyptus grandis
Eucgr.D00342 1.0kb downstream 1.0kb downstream 8517 true Chr04: 5913208-5921724 Eucalyptus grandis
Eucgr.D00342 1.0kb downstream 1.0kb downstream 1000 false Chr04: 5920725-5921724 Eucalyptus grandis
Eucgr.D00342 2.0kb upstream 2.0kb upstream 9517 true Chr04: 5911208-5920724 Eucalyptus grandis
Eucgr.D00342 2.0kb upstream 2.0kb upstream 2000 false Chr04: 5911208-5913207 Eucalyptus grandis
Eucgr.D00342 2.0kb downstream 2.0kb downstream 9517 true Chr04: 5913208-5922724 Eucalyptus grandis
Eucgr.D00342 2.0kb downstream 2.0kb downstream 2000 false Chr04: 5920725-5922724 Eucalyptus grandis
Eucgr.D00342 5.0kb upstream 5.0kb upstream 12517 true Chr04: 5908208-5920724 Eucalyptus grandis
Eucgr.D00342 5.0kb upstream 5.0kb upstream 5000 false Chr04: 5908208-5913207 Eucalyptus grandis
Eucgr.D00342 5.0kb downstream 5.0kb downstream 12517 true Chr04: 5913208-5925724 Eucalyptus grandis
Eucgr.D00342 5.0kb downstream 5.0kb downstream 5000 false Chr04: 5920725-5925724 Eucalyptus grandis
Eucgr.D00342 10.0kb upstream 10.0kb upstream 17517 true Chr04: 5903208-5920724 Eucalyptus grandis
Eucgr.D00342 10.0kb upstream 10.0kb upstream 10000 false Chr04: 5903208-5913207 Eucalyptus grandis
Eucgr.D00342 10.0kb downstream 10.0kb downstream 17517 true Chr04: 5913208-5930724 Eucalyptus grandis
Eucgr.D00342 10.0kb downstream 10.0kb downstream 10000 false Chr04: 5920725-5930724 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060770 5270 Rosid View MSA
123740006 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.57798 0.0 1.56818    
cufflinks 1.54257 0.0 3.77263    
cufflinks 1.02504 0.0 2.61764    
cufflinks 0.708164 0.0 1.86618    
cufflinks 2.14833 0.0 5.0966   High
cufflinks 0.397627 0.0 1.12519 Low Low

0 Strain