Gene : SDN3 A. thaliana TAIR10
Primary Identifier:  ? AT5G67240 Defline:  (1 of 5) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70)
Genomic Order:  6274 Name:  ? AT5G67240
Secondary Identifier:  ? PAC:19665825
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67240 0.5kb upstream 0.5kb upstream 4436 true Chr5: 26824236-26828671 Arabidopsis thaliana
AT5G67240 0.5kb upstream 0.5kb upstream 500 false Chr5: 26828172-26828671 Arabidopsis thaliana
AT5G67240 0.5kb downstream 0.5kb downstream 4436 true Chr5: 26823736-26828171 Arabidopsis thaliana
AT5G67240 0.5kb downstream 0.5kb downstream 500 false Chr5: 26823736-26824235 Arabidopsis thaliana
AT5G67240 1.0kb upstream 1.0kb upstream 4936 true Chr5: 26824236-26829171 Arabidopsis thaliana
AT5G67240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26828172-26829171 Arabidopsis thaliana
AT5G67240 1.0kb downstream 1.0kb downstream 4936 true Chr5: 26823236-26828171 Arabidopsis thaliana
AT5G67240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26823236-26824235 Arabidopsis thaliana
AT5G67240 2.0kb upstream 2.0kb upstream 5936 true Chr5: 26824236-26830171 Arabidopsis thaliana
AT5G67240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26828172-26830171 Arabidopsis thaliana
AT5G67240 2.0kb downstream 2.0kb downstream 5936 true Chr5: 26822236-26828171 Arabidopsis thaliana
AT5G67240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26822236-26824235 Arabidopsis thaliana
AT5G67240 5.0kb upstream 5.0kb upstream 8936 true Chr5: 26824236-26833171 Arabidopsis thaliana
AT5G67240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26828172-26833171 Arabidopsis thaliana
AT5G67240 5.0kb downstream 5.0kb downstream 8936 true Chr5: 26819236-26828171 Arabidopsis thaliana
AT5G67240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26819236-26824235 Arabidopsis thaliana
AT5G67240 10.0kb upstream 10.0kb upstream 13936 true Chr5: 26824236-26838171 Arabidopsis thaliana
AT5G67240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26828172-26838171 Arabidopsis thaliana
AT5G67240 10.0kb downstream 10.0kb downstream 13936 true Chr5: 26814236-26828171 Arabidopsis thaliana
AT5G67240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26814236-26824235 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041485 5273 Angiosperm View MSA
122343531 5261 Brassicaceae View MSA
123838543 5264 Brassicales-Malvales View MSA
124340305 5266 SBM View MSA
124242784 5268 Malvidae View MSA
124062801 5270 Rosid View MSA
123743566 5271 Pentapetalae View MSA
122785750 5272 Eudicot View MSA
121348164 5274 Embryophyte View MSA
123427779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.827        
cufflinks 9.619        
cufflinks 4.68        
cufflinks 10.039        
cufflinks 3.699       Low
cufflinks 9.509        

0 Strain