Protein Family : small RNA degrading nuclease 3 124242784

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  33

33 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29970.t000007 (1 of 1) PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED R. communis v0.1 3911   29970: 59590-63500
orange1.1g010743m.g (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED C. sinensis v1.1 6182   scaffold00006: 1300089-1306270
AT5G05540 (1 of 1) 2.7.7.78 - GDP-D-glucose phosphorylase A. thaliana TAIR10 SDN2 2642   Chr5: 1636298-1638939
AT5G67240 (1 of 5) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) A. thaliana TAIR10 SDN3 3936   Chr5: 26824236-26828171
AT3G50100 (1 of 5) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) A. thaliana TAIR10 SDN1 2242   Chr3: 18578353-18580594
Thhalv10024938m.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED E. salsugineum v1.0 2587   scaffold_1: 3670817-3673403
Thhalv10011012m.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED E. salsugineum v1.0 2612   scaffold_16: 2599959-2602570
Thhalv10003942m.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED E. salsugineum v1.0 3637   scaffold_6: 466091-469727
Ciclev10025436m.g (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED C. clementina v1.0 6227   scaffold_7: 3586917-3593143
Lus10011504.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED L. usitatissimum v1.0 3517   scaffold260: 10834-14350
Lus10011505.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED L. usitatissimum v1.0 2439   scaffold260: 14971-17409
Lus10019321.g (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED L. usitatissimum v1.0 3401   scaffold377: 536823-540223
Gorai.003G066000 (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED G. raimondii v2.1 4450   Chr03: 13306911-13311360
Thecc1EG000687 (1 of 1) PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED T. cacao v1.1 5843   scaffold_1: 3012436-3018278
Araha.2717s0003 (1 of 3) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED A. halleri v1.1 5804   Scaffold2717: 18800-24603
Araha.4260s0005 (1 of 3) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED A. halleri v1.1 4026   Scaffold4260: 19146-23171
Araha.13672s0010 (1 of 3) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED A. halleri v1.1 2597   Scaffold13672: 47181-49777
Cagra.0342s0010 (1 of 4) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED C. grandiflora v1.1 6048   Scaffold342: 30335-36382
Cagra.1504s0055 (1 of 1) 2.7.7.78//3.1.13.1 - Exoribonuclease II / Ribonuclease II C. grandiflora v1.1 2370   Scaffold1504: 177240-179609
Cagra.1549s0001 (1 of 1) PF00076//PF00929 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Exonuclease (RNase_T) C. grandiflora v1.1 2356   Scaffold1549: 1-2356
Brara.I03377 (1 of 1) PF00076//PF00929 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Exonuclease (RNase_T) B. rapa FPsc v1.3 2452   A09: 32056877-32059328
Bostr.0568s0146 (1 of 3) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED B. stricta v1.2 3682   Scaffold568: 659408-663089
Bostr.6864s0232 (1 of 3) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED B. stricta v1.2 2488   Scaffold6864: 1142549-1145036
SapurV1A.0951s0050 (1 of 1) PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED S. purpurea v1.0 9962   chr07: 5311271-5321232
Manes.12G151100 (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED M. esculenta v6.1 3989   Chromosome12: 30894167-30898155
AL5G30220 (1 of 5) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) A. lyrata v2.1 2237   scaffold_5: 14953203-14955439
AL6G15430 (1 of 1) 2.7.7.78 - GDP-D-glucose phosphorylase A. lyrata v2.1 2495   scaffold_6: 2013251-2015745
AL8G44100 (1 of 5) K14570 - RNA exonuclease 1 (REX1, REXO1, RNH70) A. lyrata v2.1 3892   scaffold_8: 22407655-22411546
Potri.007G048000 (1 of 1) PTHR12801//PTHR12801:SF69 - EXONUCLEASE // RNA EXONUCLEASE NEF-SP-RELATED P. trichocarpa v3.1 4250   Chr07: 4439681-4443930
Podel.07G056400 (1 of 1) PTHR12801:SF69 - RNA EXONUCLEASE NEF-SP-RELATED P. deltoides WV94 v2.1 3218   Chr07: 5409285-5412502

33 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29970.m000978 R. communis v0.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
AT5G05540.1 A. thaliana TAIR10 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Thhalv10003942m E. salsugineum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Thhalv10011012m E. salsugineum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Ciclev10025436m C. clementina v1.0 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
Lus10011504 L. usitatissimum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Bostr.0568s0146.1.p B. stricta v1.2 124242784 small RNA degrading nuclease 3 2 5268 Malvidae
Carub.0005s1644.1.p C. rubella v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
orange1.1g010743m C. sinensis v1.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
AT3G50100.1 A. thaliana TAIR10 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
AT5G67240.1 A. thaliana TAIR10 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Thhalv10024938m E. salsugineum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Lus10011505 L. usitatissimum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Lus10019321 L. usitatissimum v1.0 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Gorai.003G066000.1 G. raimondii v2.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
Thecc1EG000687t2 T. cacao v1.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
Araha.4260s0005.1.p A. halleri v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Araha.2717s0003.1.p A. halleri v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Araha.13672s0010.1.p A. halleri v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Cagra.1549s0001.1.p C. grandiflora v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Cagra.1504s0055.1.p C. grandiflora v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Cagra.0342s0010.1.p C. grandiflora v1.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Brara.I03377.1.p B. rapa FPsc v1.3 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
Bostr.6864s0232.1.p B. stricta v1.2 124242784 small RNA degrading nuclease 3 2 5268 Malvidae
SapurV1A.0951s0050.1.p S. purpurea v1.0 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
Manes.12G151100.1.p M. esculenta v6.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae
AL8G44100.t1 A. lyrata v2.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
AL6G15430.t1 A. lyrata v2.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
AL5G30220.t1 A. lyrata v2.1 124242784 small RNA degrading nuclease 3 3 5268 Malvidae
Potri.007G048000.1.p P. trichocarpa v3.1 124242784 small RNA degrading nuclease 3 1 5268 Malvidae