Gene : CSP3 A. thaliana TAIR10
Primary Identifier:  ? AT2G17870 Defline:  (1 of 3) K09250 - cellular nucleic acid-binding protein (CNBP)
Genomic Order:  1020 Name:  ? AT2G17870
Secondary Identifier:  ? PAC:19641292
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G17870 0.5kb upstream 0.5kb upstream 1756 true Chr2: 7763975-7765730 Arabidopsis thaliana
AT2G17870 0.5kb upstream 0.5kb upstream 500 false Chr2: 7765231-7765730 Arabidopsis thaliana
AT2G17870 0.5kb downstream 0.5kb downstream 1756 true Chr2: 7763475-7765230 Arabidopsis thaliana
AT2G17870 0.5kb downstream 0.5kb downstream 500 false Chr2: 7763475-7763974 Arabidopsis thaliana
AT2G17870 1.0kb upstream 1.0kb upstream 2256 true Chr2: 7763975-7766230 Arabidopsis thaliana
AT2G17870 1.0kb upstream 1.0kb upstream 1000 false Chr2: 7765231-7766230 Arabidopsis thaliana
AT2G17870 1.0kb downstream 1.0kb downstream 2256 true Chr2: 7762975-7765230 Arabidopsis thaliana
AT2G17870 1.0kb downstream 1.0kb downstream 1000 false Chr2: 7762975-7763974 Arabidopsis thaliana
AT2G17870 2.0kb upstream 2.0kb upstream 3256 true Chr2: 7763975-7767230 Arabidopsis thaliana
AT2G17870 2.0kb upstream 2.0kb upstream 2000 false Chr2: 7765231-7767230 Arabidopsis thaliana
AT2G17870 2.0kb downstream 2.0kb downstream 3256 true Chr2: 7761975-7765230 Arabidopsis thaliana
AT2G17870 2.0kb downstream 2.0kb downstream 2000 false Chr2: 7761975-7763974 Arabidopsis thaliana
AT2G17870 5.0kb upstream 5.0kb upstream 6256 true Chr2: 7763975-7770230 Arabidopsis thaliana
AT2G17870 5.0kb upstream 5.0kb upstream 5000 false Chr2: 7765231-7770230 Arabidopsis thaliana
AT2G17870 5.0kb downstream 5.0kb downstream 6256 true Chr2: 7758975-7765230 Arabidopsis thaliana
AT2G17870 5.0kb downstream 5.0kb downstream 5000 false Chr2: 7758975-7763974 Arabidopsis thaliana
AT2G17870 10.0kb upstream 10.0kb upstream 11256 true Chr2: 7763975-7775230 Arabidopsis thaliana
AT2G17870 10.0kb upstream 10.0kb upstream 10000 false Chr2: 7765231-7775230 Arabidopsis thaliana
AT2G17870 10.0kb downstream 10.0kb downstream 11256 true Chr2: 7753975-7765230 Arabidopsis thaliana
AT2G17870 10.0kb downstream 10.0kb downstream 10000 false Chr2: 7753975-7763974 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376203 5261 Brassicaceae View MSA
123837622 5264 Brassicales-Malvales View MSA
124338789 5266 SBM View MSA
124250533 5268 Malvidae View MSA
124063967 5270 Rosid View MSA
123747748 5271 Pentapetalae View MSA
122791026 5272 Eudicot View MSA
122042982 5273 Angiosperm View MSA
121347174 5274 Embryophyte View MSA
123428407 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.117        
cufflinks 39.003     High  
cufflinks 23.423        
cufflinks 43.463     High  
cufflinks 25.161        
cufflinks 47.392     High High

0 Strain