Gene : Gorai.004G253700 G. raimondii v2.1
Defline:  (1 of 2) PTHR30603//PTHR30603:SF25 - RNA POLYMERASE SIGMA FACTOR RPO Genomic Order:  2537
Name:  ? Gorai.004G253700 Secondary Identifier:  ? PAC:26774681
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.004G253700 0.5kb upstream 0.5kb upstream 5453 true Chr04: 59086377-59091829 Gossypium raimondii
Gorai.004G253700 0.5kb upstream 0.5kb upstream 500 false Chr04: 59091330-59091829 Gossypium raimondii
Gorai.004G253700 0.5kb downstream 0.5kb downstream 5453 true Chr04: 59085877-59091329 Gossypium raimondii
Gorai.004G253700 0.5kb downstream 0.5kb downstream 500 false Chr04: 59085877-59086376 Gossypium raimondii
Gorai.004G253700 1.0kb upstream 1.0kb upstream 5953 true Chr04: 59086377-59092329 Gossypium raimondii
Gorai.004G253700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 59091330-59092329 Gossypium raimondii
Gorai.004G253700 1.0kb downstream 1.0kb downstream 5953 true Chr04: 59085377-59091329 Gossypium raimondii
Gorai.004G253700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 59085377-59086376 Gossypium raimondii
Gorai.004G253700 2.0kb upstream 2.0kb upstream 6953 true Chr04: 59086377-59093329 Gossypium raimondii
Gorai.004G253700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 59091330-59093329 Gossypium raimondii
Gorai.004G253700 2.0kb downstream 2.0kb downstream 6953 true Chr04: 59084377-59091329 Gossypium raimondii
Gorai.004G253700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 59084377-59086376 Gossypium raimondii
Gorai.004G253700 5.0kb upstream 5.0kb upstream 9953 true Chr04: 59086377-59096329 Gossypium raimondii
Gorai.004G253700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 59091330-59096329 Gossypium raimondii
Gorai.004G253700 5.0kb downstream 5.0kb downstream 9953 true Chr04: 59081377-59091329 Gossypium raimondii
Gorai.004G253700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 59081377-59086376 Gossypium raimondii
Gorai.004G253700 10.0kb upstream 10.0kb upstream 14953 true Chr04: 59086377-59101329 Gossypium raimondii
Gorai.004G253700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 59091330-59101329 Gossypium raimondii
Gorai.004G253700 10.0kb downstream 10.0kb downstream 14953 true Chr04: 59076377-59091329 Gossypium raimondii
Gorai.004G253700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 59076377-59086376 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123806397 5264 Brassicales-Malvales Singleton cluster - no MSA
124303309 5266 SBM Singleton cluster - no MSA
124154003 5268 Malvidae Singleton cluster - no MSA
123879047 5270 Rosid Singleton cluster - no MSA
123751307 5271 Pentapetalae View MSA
122790419 5272 Eudicot View MSA
122046988 5273 Angiosperm View MSA
121346903 5274 Embryophyte View MSA
123428711 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain