Gene : AL3G10500 A. lyrata v2.1
Defline:  (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED Genomic Order:  47
Name:  ? AL3G10500 Secondary Identifier:  ? PAC:35942496
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G10500 0.5kb upstream 0.5kb upstream 3695   true scaffold_3: 151497-155191 Arabidopsis lyrata
AL3G10500 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 154692-155191 Arabidopsis lyrata
AL3G10500 0.5kb downstream 0.5kb downstream 3695   true scaffold_3: 150997-154691 Arabidopsis lyrata
AL3G10500 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 150997-151496 Arabidopsis lyrata
AL3G10500 1.0kb upstream 1.0kb upstream 4195   true scaffold_3: 151497-155691 Arabidopsis lyrata
AL3G10500 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 154692-155691 Arabidopsis lyrata
AL3G10500 1.0kb downstream 1.0kb downstream 4195   true scaffold_3: 150497-154691 Arabidopsis lyrata
AL3G10500 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 150497-151496 Arabidopsis lyrata
AL3G10500 2.0kb upstream 2.0kb upstream 5195   true scaffold_3: 151497-156691 Arabidopsis lyrata
AL3G10500 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 154692-156691 Arabidopsis lyrata
AL3G10500 2.0kb downstream 2.0kb downstream 5195   true scaffold_3: 149497-154691 Arabidopsis lyrata
AL3G10500 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 149497-151496 Arabidopsis lyrata
AL3G10500 5.0kb upstream 5.0kb upstream 8195   true scaffold_3: 151497-159691 Arabidopsis lyrata
AL3G10500 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 154692-159691 Arabidopsis lyrata
AL3G10500 5.0kb downstream 5.0kb downstream 8195   true scaffold_3: 146497-154691 Arabidopsis lyrata
AL3G10500 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 146497-151496 Arabidopsis lyrata
AL3G10500 10.0kb upstream 10.0kb upstream 13195   true scaffold_3: 151497-164691 Arabidopsis lyrata
AL3G10500 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 154692-164691 Arabidopsis lyrata
AL3G10500 10.0kb downstream 10.0kb downstream 13195   true scaffold_3: 141497-154691 Arabidopsis lyrata
AL3G10500 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 141497-151496 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372022 5261 Brassicaceae View MSA
123800280 5264 Brassicales-Malvales View MSA
124297713 5266 SBM View MSA
124251703 5268 Malvidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain