Gene : Tp57577_TGAC_v2_gene6201 T. pratense v2
Defline:  (1 of 6) K16280 - E3 ubiquitin-protein ligase RGLG [EC:6.3.2.19] (RGLG) Genomic Order:  724
Name:  ? Tp57577_TGAC_v2_gene6201 Secondary Identifier:  ? PAC:35989293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene6201 0.5kb upstream 0.5kb upstream 4411 true Tp57577_TGAC_v2_LG3: 5451745-5456155 Trifolium pratense
Tp57577_TGAC_v2_gene6201 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 5455656-5456155 Trifolium pratense
Tp57577_TGAC_v2_gene6201 0.5kb downstream 0.5kb downstream 4411 true Tp57577_TGAC_v2_LG3: 5451245-5455655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 5451245-5451744 Trifolium pratense
Tp57577_TGAC_v2_gene6201 1.0kb upstream 1.0kb upstream 4911 true Tp57577_TGAC_v2_LG3: 5451745-5456655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 5455656-5456655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 1.0kb downstream 1.0kb downstream 4911 true Tp57577_TGAC_v2_LG3: 5450745-5455655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 5450745-5451744 Trifolium pratense
Tp57577_TGAC_v2_gene6201 2.0kb upstream 2.0kb upstream 5911 true Tp57577_TGAC_v2_LG3: 5451745-5457655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 5455656-5457655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 2.0kb downstream 2.0kb downstream 5911 true Tp57577_TGAC_v2_LG3: 5449745-5455655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 5449745-5451744 Trifolium pratense
Tp57577_TGAC_v2_gene6201 5.0kb upstream 5.0kb upstream 8911 true Tp57577_TGAC_v2_LG3: 5451745-5460655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 5455656-5460655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 5.0kb downstream 5.0kb downstream 8911 true Tp57577_TGAC_v2_LG3: 5446745-5455655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 5446745-5451744 Trifolium pratense
Tp57577_TGAC_v2_gene6201 10.0kb upstream 10.0kb upstream 13911 true Tp57577_TGAC_v2_LG3: 5451745-5465655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 5455656-5465655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 10.0kb downstream 10.0kb downstream 13911 true Tp57577_TGAC_v2_LG3: 5441745-5455655 Trifolium pratense
Tp57577_TGAC_v2_gene6201 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 5441745-5451744 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313782 5265 Fabidae View MSA
124070395 5270 Rosid View MSA
123748343 5271 Pentapetalae View MSA
122786233 5272 Eudicot View MSA
122045047 5273 Angiosperm View MSA
121350791 5274 Embryophyte View MSA
123424237 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain