Protein : Solyc07g008880.2.1 S. lycopersicum ITAG2.4

Secondary Identifier:  PAC:36159816 Organism Name:  Solanum lycopersicum
Length:  2384   Name:  Solyc07g008880.2.1
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Proteins

10 Protein Domains

DB identifier Type Name
IPR012337 Domain Ribonuclease H-like domain
IPR000555 Domain JAB1/MPN/MOV34 metalloenzyme domain
IPR027652 Family Pre-mRNA-processing-splicing factor 8
IPR021983 Domain PRP8 domain IV core
IPR019582 Domain RNA recognition motif, spliceosomal PrP8
IPR019581 Domain Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding
IPR019580 Domain Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding
IPR012984 Domain PROCT domain
IPR012592 Domain PROCN domain
IPR012591 Domain PRO8NT domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Solyc07g008880.2.1_CDS 7155   SL2.50ch07: 3846006-3858255 Solanum lycopersicum

31 Ontology Annotations

Ontology Term Db Gene/Protein Name
SM00232 SMART Solyc07g008880.2.1
SSF53098 SSF Solyc07g008880.2.1
PF08082 PFAM Solyc07g008880.2.1
PF08083 PFAM Solyc07g008880.2.1
PF08084 PFAM Solyc07g008880.2.1
PF10596 PFAM Solyc07g008880.2.1
PF10597 PFAM Solyc07g008880.2.1
PF10598 PFAM Solyc07g008880.2.1
PF12134 PFAM Solyc07g008880.2.1
PD149576 PRODOM Solyc07g008880.2.1
IPR019582 InterPro Solyc07g008880.2.1
IPR021983 InterPro Solyc07g008880.2.1
IPR027652 InterPro Solyc07g008880.2.1
K12856 KEGG Solyc07g008880.2.1
PTHR11140 PANTHER Solyc07g008880.2.1
PTHR11140:SF0 PANTHER Solyc07g008880.2.1
PF01398 PFAM Solyc07g008880.2.1
IPR012592 InterPro Solyc07g008880.2.1
IPR012984 InterPro Solyc07g008880.2.1
IPR019580 InterPro Solyc07g008880.2.1
IPR019581 InterPro Solyc07g008880.2.1
GO:0005515 GO Solyc07g008880.2.1
GO:0005681 GO Solyc07g008880.2.1
GO:0017070 GO Solyc07g008880.2.1
GO:0030623 GO Solyc07g008880.2.1
IPR000555 InterPro Solyc07g008880.2.1
IPR012337 InterPro Solyc07g008880.2.1
IPR012591 InterPro Solyc07g008880.2.1
GO:0000398 GO Solyc07g008880.2.1
GO:0003676 GO Solyc07g008880.2.1

0 Pathway Components

0 Pathways