Gene : Potri.001G289800 P. trichocarpa v3.1
Defline:  (1 of 3) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  3000
Name:  ? Potri.001G289800 Secondary Identifier:  ? PAC:37277315
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.001G289800 0.5kb upstream 0.5kb upstream 14243 true Chr01: 29562773-29577015 Populus trichocarpa
Potri.001G289800 0.5kb upstream 0.5kb upstream 500 false Chr01: 29562773-29563272 Populus trichocarpa
Potri.001G289800 0.5kb downstream 0.5kb downstream 14243 true Chr01: 29563273-29577515 Populus trichocarpa
Potri.001G289800 0.5kb downstream 0.5kb downstream 500 false Chr01: 29577016-29577515 Populus trichocarpa
Potri.001G289800 1.0kb upstream 1.0kb upstream 14743 true Chr01: 29562273-29577015 Populus trichocarpa
Potri.001G289800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 29562273-29563272 Populus trichocarpa
Potri.001G289800 1.0kb downstream 1.0kb downstream 14743 true Chr01: 29563273-29578015 Populus trichocarpa
Potri.001G289800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 29577016-29578015 Populus trichocarpa
Potri.001G289800 2.0kb upstream 2.0kb upstream 15743 true Chr01: 29561273-29577015 Populus trichocarpa
Potri.001G289800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 29561273-29563272 Populus trichocarpa
Potri.001G289800 2.0kb downstream 2.0kb downstream 15743 true Chr01: 29563273-29579015 Populus trichocarpa
Potri.001G289800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 29577016-29579015 Populus trichocarpa
Potri.001G289800 5.0kb upstream 5.0kb upstream 18743 true Chr01: 29558273-29577015 Populus trichocarpa
Potri.001G289800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 29558273-29563272 Populus trichocarpa
Potri.001G289800 5.0kb downstream 5.0kb downstream 18743 true Chr01: 29563273-29582015 Populus trichocarpa
Potri.001G289800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 29577016-29582015 Populus trichocarpa
Potri.001G289800 10.0kb upstream 10.0kb upstream 23743 true Chr01: 29553273-29577015 Populus trichocarpa
Potri.001G289800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 29553273-29563272 Populus trichocarpa
Potri.001G289800 10.0kb downstream 10.0kb downstream 23743 true Chr01: 29563273-29587015 Populus trichocarpa
Potri.001G289800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 29577016-29587015 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464660 5262 Malpighiales View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain