Gene : Potri.009G085400 P. trichocarpa v3.1
Defline:  (1 of 3) K12821 - pre-mRNA-processing factor 40 (PRPF40, PRP40) Genomic Order:  873
Name:  ? Potri.009G085400 Secondary Identifier:  ? PAC:37227809
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.009G085400 0.5kb upstream 0.5kb upstream 15328 true Chr09: 7994121-8009448 Populus trichocarpa
Potri.009G085400 0.5kb upstream 0.5kb upstream 500 false Chr09: 7994121-7994620 Populus trichocarpa
Potri.009G085400 0.5kb downstream 0.5kb downstream 15328 true Chr09: 7994621-8009948 Populus trichocarpa
Potri.009G085400 0.5kb downstream 0.5kb downstream 500 false Chr09: 8009449-8009948 Populus trichocarpa
Potri.009G085400 1.0kb upstream 1.0kb upstream 15828 true Chr09: 7993621-8009448 Populus trichocarpa
Potri.009G085400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7993621-7994620 Populus trichocarpa
Potri.009G085400 1.0kb downstream 1.0kb downstream 15828 true Chr09: 7994621-8010448 Populus trichocarpa
Potri.009G085400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8009449-8010448 Populus trichocarpa
Potri.009G085400 2.0kb upstream 2.0kb upstream 16828 true Chr09: 7992621-8009448 Populus trichocarpa
Potri.009G085400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7992621-7994620 Populus trichocarpa
Potri.009G085400 2.0kb downstream 2.0kb downstream 16828 true Chr09: 7994621-8011448 Populus trichocarpa
Potri.009G085400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8009449-8011448 Populus trichocarpa
Potri.009G085400 5.0kb upstream 5.0kb upstream 19828 true Chr09: 7989621-8009448 Populus trichocarpa
Potri.009G085400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7989621-7994620 Populus trichocarpa
Potri.009G085400 5.0kb downstream 5.0kb downstream 19828 true Chr09: 7994621-8014448 Populus trichocarpa
Potri.009G085400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8009449-8014448 Populus trichocarpa
Potri.009G085400 10.0kb upstream 10.0kb upstream 24828 true Chr09: 7984621-8009448 Populus trichocarpa
Potri.009G085400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7984621-7994620 Populus trichocarpa
Potri.009G085400 10.0kb downstream 10.0kb downstream 24828 true Chr09: 7994621-8019448 Populus trichocarpa
Potri.009G085400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8009449-8019448 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464660 5262 Malpighiales View MSA
124245383 5268 Malvidae View MSA
124060501 5270 Rosid View MSA
123741058 5271 Pentapetalae View MSA
122797131 5272 Eudicot View MSA
122049454 5273 Angiosperm View MSA
121347556 5274 Embryophyte View MSA
123423988 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain