Gene : Thecc1EG044274 T. cacao v1.1
Defline:  (1 of 7) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) Genomic Order:  1137
Name:  ? Thecc1EG044274 Secondary Identifier:  ? PAC:27442176
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044274 0.5kb upstream 0.5kb upstream 12005 true scaffold_10r: 15331700-15343704 Theobroma cacao
Thecc1EG044274 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 15331700-15332199 Theobroma cacao
Thecc1EG044274 0.5kb downstream 0.5kb downstream 12005 true scaffold_10r: 15332200-15344204 Theobroma cacao
Thecc1EG044274 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 15343705-15344204 Theobroma cacao
Thecc1EG044274 1.0kb upstream 1.0kb upstream 12505 true scaffold_10r: 15331200-15343704 Theobroma cacao
Thecc1EG044274 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 15331200-15332199 Theobroma cacao
Thecc1EG044274 1.0kb downstream 1.0kb downstream 12505 true scaffold_10r: 15332200-15344704 Theobroma cacao
Thecc1EG044274 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 15343705-15344704 Theobroma cacao
Thecc1EG044274 2.0kb upstream 2.0kb upstream 13505 true scaffold_10r: 15330200-15343704 Theobroma cacao
Thecc1EG044274 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 15330200-15332199 Theobroma cacao
Thecc1EG044274 2.0kb downstream 2.0kb downstream 13505 true scaffold_10r: 15332200-15345704 Theobroma cacao
Thecc1EG044274 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 15343705-15345704 Theobroma cacao
Thecc1EG044274 5.0kb upstream 5.0kb upstream 16505 true scaffold_10r: 15327200-15343704 Theobroma cacao
Thecc1EG044274 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 15327200-15332199 Theobroma cacao
Thecc1EG044274 5.0kb downstream 5.0kb downstream 16505 true scaffold_10r: 15332200-15348704 Theobroma cacao
Thecc1EG044274 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 15343705-15348704 Theobroma cacao
Thecc1EG044274 10.0kb upstream 10.0kb upstream 21505 true scaffold_10r: 15322200-15343704 Theobroma cacao
Thecc1EG044274 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 15322200-15332199 Theobroma cacao
Thecc1EG044274 10.0kb downstream 10.0kb downstream 21505 true scaffold_10r: 15332200-15353704 Theobroma cacao
Thecc1EG044274 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 15343705-15353704 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823791 5264 Brassicales-Malvales View MSA
124319847 5266 SBM View MSA
124255311 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain