14 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Thecc1EG044274 | (1 of 7) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
11505
 |
scaffold_10r: 15332200-15343704 | |
| Thecc1EG044868 | (1 of 4) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
5598
|
scaffold_10r: 20001618-20007215 | |
| Thecc1EG045859 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
7344
|
scaffold_12: 721286-728629 | |
| Thecc1EG045699 | (1 of 7) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
5893
|
scaffold_11: 773749-779641 | |
| Thecc1EG045650 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
8216
|
scaffold_11: 258453-266668 | |
| Thecc1EG009073 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
41949
|
scaffold_2: 19750690-19792638 | |
| Thecc1EG013057 | (1 of 2) PF00098//PF00665//PF03732 - Zinc knuckle (zf-CCHC) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
13145
|
scaffold_3: 8832085-8845229 | |
| Thecc1EG013764 | (1 of 4) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
7967
|
scaffold_3: 16933414-16941380 | |
| Thecc1EG023614 | (1 of 1) PF00078//PF00098//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Integrase core domain (rve) | T. cacao v1.1 |
11991
|
scaffold_5: 16613060-16625050 | |
| Thecc1EG023686 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
10975
|
scaffold_5: 17437798-17448772 | |
| Thecc1EG023662 | (1 of 4) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
16685
|
scaffold_5: 17176246-17192930 | |
| Thecc1EG028107 | (1 of 4) PF00385//PF00665 - Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) | T. cacao v1.1 |
2376
|
scaffold_6: 10962966-10965341 | |
| Manes.06G040000 | (1 of 1) PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | M. esculenta v6.1 |
4416
|
Chromosome06: 11122736-11127151 | |
| Manes.17G015900 | (1 of 1) PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) | M. esculenta v6.1 |
3175
|
Chromosome17: 5499090-5502264 |
14 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Thecc1EG028107t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG045859t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG013764t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG045650t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG009073t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG023686t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG044274t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG013057t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG023614t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG044868t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG023662t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Thecc1EG045699t1 | T. cacao v1.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 12 | 5268 | Malvidae |
| Manes.06G040000.1.p | M. esculenta v6.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 2 | 5268 | Malvidae |
| Manes.17G015900.1.p | M. esculenta v6.1 | 124255311 | PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) | 2 | 5268 | Malvidae |
