Gene : Manes.06G040000 M. esculenta v6.1
Defline:  (1 of 1) PF00078//PF00385//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  400
Name:  ? Manes.06G040000 Secondary Identifier:  ? PAC:32347256
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.06G040000 0.5kb upstream 0.5kb upstream 4916 true Chromosome06: 11122736-11127651 Manihot esculenta
Manes.06G040000 0.5kb upstream 0.5kb upstream 500 false Chromosome06: 11127152-11127651 Manihot esculenta
Manes.06G040000 0.5kb downstream 0.5kb downstream 4916 true Chromosome06: 11122236-11127151 Manihot esculenta
Manes.06G040000 0.5kb downstream 0.5kb downstream 500 false Chromosome06: 11122236-11122735 Manihot esculenta
Manes.06G040000 1.0kb upstream 1.0kb upstream 5416 true Chromosome06: 11122736-11128151 Manihot esculenta
Manes.06G040000 1.0kb upstream 1.0kb upstream 1000 false Chromosome06: 11127152-11128151 Manihot esculenta
Manes.06G040000 1.0kb downstream 1.0kb downstream 5416 true Chromosome06: 11121736-11127151 Manihot esculenta
Manes.06G040000 1.0kb downstream 1.0kb downstream 1000 false Chromosome06: 11121736-11122735 Manihot esculenta
Manes.06G040000 2.0kb upstream 2.0kb upstream 6416 true Chromosome06: 11122736-11129151 Manihot esculenta
Manes.06G040000 2.0kb upstream 2.0kb upstream 2000 false Chromosome06: 11127152-11129151 Manihot esculenta
Manes.06G040000 2.0kb downstream 2.0kb downstream 6416 true Chromosome06: 11120736-11127151 Manihot esculenta
Manes.06G040000 2.0kb downstream 2.0kb downstream 2000 false Chromosome06: 11120736-11122735 Manihot esculenta
Manes.06G040000 5.0kb upstream 5.0kb upstream 9416 true Chromosome06: 11122736-11132151 Manihot esculenta
Manes.06G040000 5.0kb upstream 5.0kb upstream 5000 false Chromosome06: 11127152-11132151 Manihot esculenta
Manes.06G040000 5.0kb downstream 5.0kb downstream 9416 true Chromosome06: 11117736-11127151 Manihot esculenta
Manes.06G040000 5.0kb downstream 5.0kb downstream 5000 false Chromosome06: 11117736-11122735 Manihot esculenta
Manes.06G040000 10.0kb upstream 10.0kb upstream 14416 true Chromosome06: 11122736-11137151 Manihot esculenta
Manes.06G040000 10.0kb upstream 10.0kb upstream 10000 false Chromosome06: 11127152-11137151 Manihot esculenta
Manes.06G040000 10.0kb downstream 10.0kb downstream 14416 true Chromosome06: 11112736-11127151 Manihot esculenta
Manes.06G040000 10.0kb downstream 10.0kb downstream 10000 false Chromosome06: 11112736-11122735 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122435626 5262 Malpighiales View MSA
124255311 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain