Gene : Thecc1EG044148 T. cacao v1.1
Defline:  (1 of 7) 3.4.23.47 - HIV-2 retropepsin Genomic Order:  1084
Name:  ? Thecc1EG044148 Secondary Identifier:  ? PAC:27442919
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044148 0.5kb upstream 0.5kb upstream 6327 true scaffold_10r: 14035365-14041691 Theobroma cacao
Thecc1EG044148 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 14035365-14035864 Theobroma cacao
Thecc1EG044148 0.5kb downstream 0.5kb downstream 6327 true scaffold_10r: 14035865-14042191 Theobroma cacao
Thecc1EG044148 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 14041692-14042191 Theobroma cacao
Thecc1EG044148 1.0kb upstream 1.0kb upstream 6827 true scaffold_10r: 14034865-14041691 Theobroma cacao
Thecc1EG044148 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 14034865-14035864 Theobroma cacao
Thecc1EG044148 1.0kb downstream 1.0kb downstream 6827 true scaffold_10r: 14035865-14042691 Theobroma cacao
Thecc1EG044148 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 14041692-14042691 Theobroma cacao
Thecc1EG044148 2.0kb upstream 2.0kb upstream 7827 true scaffold_10r: 14033865-14041691 Theobroma cacao
Thecc1EG044148 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 14033865-14035864 Theobroma cacao
Thecc1EG044148 2.0kb downstream 2.0kb downstream 7827 true scaffold_10r: 14035865-14043691 Theobroma cacao
Thecc1EG044148 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 14041692-14043691 Theobroma cacao
Thecc1EG044148 5.0kb upstream 5.0kb upstream 10827 true scaffold_10r: 14030865-14041691 Theobroma cacao
Thecc1EG044148 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 14030865-14035864 Theobroma cacao
Thecc1EG044148 5.0kb downstream 5.0kb downstream 10827 true scaffold_10r: 14035865-14046691 Theobroma cacao
Thecc1EG044148 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 14041692-14046691 Theobroma cacao
Thecc1EG044148 10.0kb upstream 10.0kb upstream 15827 true scaffold_10r: 14025865-14041691 Theobroma cacao
Thecc1EG044148 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 14025865-14035864 Theobroma cacao
Thecc1EG044148 10.0kb downstream 10.0kb downstream 15827 true scaffold_10r: 14035865-14051691 Theobroma cacao
Thecc1EG044148 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 14041692-14051691 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain