85 Genes
| Primary Identifier | Defline | Organism Name | Symbol | Length | Chromosome Location |
|---|---|---|---|---|---|
| Thecc1EG002384 | (1 of 57) PF08284 - Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
8953
 |
scaffold_1: 13558142-13567094 | |
| Thecc1EG002485 | (1 of 230) 2.7.7.49//2.7.7.7//3.1.26.4 - RNA-directed DNA polymerase / Revertase // DNA-directed DNA polymerase / DNA-dependent DNA polymerase // Ribonuclease H / RNase H | T. cacao v1.1 |
7680
|
scaffold_1: 14198429-14206108 | |
| Thecc1EG002769 | (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) | T. cacao v1.1 |
21576
|
scaffold_1: 16206752-16228327 | |
| Thecc1EG003025 | (1 of 2) PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) | T. cacao v1.1 |
11771
|
scaffold_1: 18225816-18237586 | |
| Thecc1EG002991 | (1 of 2) PF03732//PF08284 - Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
20814
|
scaffold_1: 17924302-17945115 | |
| Thecc1EG003791 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
5461
|
scaffold_1: 26674900-26680360 | |
| Thecc1EG003698 | (1 of 4) PF00078//PF00665//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
8923
|
scaffold_1: 25729801-25738723 | |
| Thecc1EG003516 | Gag protease polyprotein (71%P) | T. cacao v1.1 |
7423
|
scaffold_1: 24023518-24030940 | |
| Thecc1EG003298 | (1 of 1) PF00078//PF00098//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Zinc knuckle (zf-CCHC) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
9127
|
scaffold_1: 21590206-21599332 | |
| Thecc1EG043497 | Gag protease polyprotein | T. cacao v1.1 |
7621
|
scaffold_10r: 6811757-6819377 | |
| Thecc1EG043763 | (1 of 3) PF00078//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
22041
|
scaffold_10r: 9643489-9665529 | |
| Thecc1EG043584 | Gag protease polyprotein (72%P) | T. cacao v1.1 |
6625
|
scaffold_10r: 7752327-7758951 | |
| Thecc1EG044456 | Uncharacterized protein (69%P) | T. cacao v1.1 |
36901
|
scaffold_10r: 16879432-16916332 | |
| Thecc1EG044148 | (1 of 7) 3.4.23.47 - HIV-2 retropepsin | T. cacao v1.1 |
5827
|
scaffold_10r: 14035865-14041691 | |
| Thecc1EG044856 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
8575
|
scaffold_10r: 19846176-19854750 | |
| Thecc1EG044875 | Uncharacterized protein (75%P) | T. cacao v1.1 |
42915
|
scaffold_10r: 20127930-20170844 | |
| Thecc1EG044877 | (1 of 2) PF00078//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
8270
|
scaffold_10r: 20171195-20179464 | |
| Thecc1EG045215 | Gag protease polyprotein (63%P) | T. cacao v1.1 |
4007
|
scaffold_10r: 23152858-23156864 | |
| Thecc1EG045983 | (1 of 4) PF00098//PF03732//PF08284 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
10246
|
scaffold_15: 204738-214983 | |
| Thecc1EG046259 | (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) | T. cacao v1.1 |
7046
|
scaffold_176: 2566-9611 | |
| Thecc1EG007556 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
4575
|
scaffold_2: 7642237-7646811 | |
| Thecc1EG007817 | (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
15887
|
scaffold_2: 9137117-9153003 | |
| Thecc1EG008373 | (1 of 15) PTHR10178//PTHR10178:SF309 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
12532
|
scaffold_2: 13024174-13036705 | |
| Thecc1EG008533 | (1 of 2) PTHR10178//PTHR10178:SF275 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
7672
|
scaffold_2: 14608232-14615903 | |
| Thecc1EG008508 | Gag protease polyprotein (65%P) | T. cacao v1.1 |
943
|
scaffold_2: 14353317-14354259 | |
| Thecc1EG009549 | (1 of 2) PF00078//PF00665//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
45745
|
scaffold_2: 25263211-25308955 | |
| Thecc1EG009557 | (1 of 16) PF00098//PF03732 - Zinc knuckle (zf-CCHC) // Retrotransposon gag protein (Retrotrans_gag) | T. cacao v1.1 |
2270
|
scaffold_2: 25352761-25355030 | |
| Thecc1EG009998 | (1 of 1) PF00098//PF00665//PF08284 - Zinc knuckle (zf-CCHC) // Integrase core domain (rve) // Retroviral aspartyl protease (RVP_2) | T. cacao v1.1 |
36575
|
scaffold_2: 29783377-29819951 | |
| Thecc1EG009825 | (1 of 2) PTHR10178//PTHR10178:SF275 - GAG/POL/ENV POLYPROTEIN // SUBFAMILY NOT NAMED | T. cacao v1.1 |
2651
|
scaffold_2: 27852368-27855018 | |
| Thecc1EG009759 | Gag protease polyprotein | T. cacao v1.1 |
5358
|
scaffold_2: 27251155-27256512 |
85 Members
| Protein Name | Organism Name | Cluster ID | Cluster Name | Same Organism Count | Method ID | Method Name |
|---|---|---|---|---|---|---|
| Thecc1EG022803t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG023155t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG039916t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG038839t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG039262t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG039121t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG039915t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG002485t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG002991t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG003516t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG043584t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG043497t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG044875t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG043763t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG044456t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG033158t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG032125t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG032553t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG032120t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG012960t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG013681t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG018122t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG018598t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG018191t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG018622t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG035580t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG035772t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG009694t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG007817t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
| Thecc1EG009825t1 | T. cacao v1.1 | 124319979 | PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED | 85 | 5266 | SBM |
