Gene : Thecc1EG043497 T. cacao v1.1
Defline:  Gag protease polyprotein Genomic Order:  917
Name:  ? Thecc1EG043497 Secondary Identifier:  ? PAC:27442133
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043497 0.5kb upstream 0.5kb upstream 8121 true scaffold_10r: 6811757-6819877 Theobroma cacao
Thecc1EG043497 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 6819378-6819877 Theobroma cacao
Thecc1EG043497 0.5kb downstream 0.5kb downstream 8121 true scaffold_10r: 6811257-6819377 Theobroma cacao
Thecc1EG043497 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 6811257-6811756 Theobroma cacao
Thecc1EG043497 1.0kb upstream 1.0kb upstream 8621 true scaffold_10r: 6811757-6820377 Theobroma cacao
Thecc1EG043497 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 6819378-6820377 Theobroma cacao
Thecc1EG043497 1.0kb downstream 1.0kb downstream 8621 true scaffold_10r: 6810757-6819377 Theobroma cacao
Thecc1EG043497 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 6810757-6811756 Theobroma cacao
Thecc1EG043497 2.0kb upstream 2.0kb upstream 9621 true scaffold_10r: 6811757-6821377 Theobroma cacao
Thecc1EG043497 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 6819378-6821377 Theobroma cacao
Thecc1EG043497 2.0kb downstream 2.0kb downstream 9621 true scaffold_10r: 6809757-6819377 Theobroma cacao
Thecc1EG043497 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 6809757-6811756 Theobroma cacao
Thecc1EG043497 5.0kb upstream 5.0kb upstream 12621 true scaffold_10r: 6811757-6824377 Theobroma cacao
Thecc1EG043497 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 6819378-6824377 Theobroma cacao
Thecc1EG043497 5.0kb downstream 5.0kb downstream 12621 true scaffold_10r: 6806757-6819377 Theobroma cacao
Thecc1EG043497 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 6806757-6811756 Theobroma cacao
Thecc1EG043497 10.0kb upstream 10.0kb upstream 17621 true scaffold_10r: 6811757-6829377 Theobroma cacao
Thecc1EG043497 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 6819378-6829377 Theobroma cacao
Thecc1EG043497 10.0kb downstream 10.0kb downstream 17621 true scaffold_10r: 6801757-6819377 Theobroma cacao
Thecc1EG043497 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 6801757-6811756 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823927 5264 Brassicales-Malvales View MSA
124319979 5266 SBM View MSA
124255310 5268 Malvidae View MSA
124074843 5270 Rosid View MSA
123753427 5271 Pentapetalae View MSA
122797714 5272 Eudicot View MSA
122051549 5273 Angiosperm View MSA
123429154 5275 Viridiplantae View MSA
121351706 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain